PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv1_005070_wokp.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

bZIP

Protein Properties

Length: 532aa MW: 58415.4 Da PI: 6.7287

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv1_005070_wokp.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	8.9e-11	365	423	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK+ +i+eLe kv++L++e ++L +l l+ ++ l++++ Bv1_005070_wokp.t1 365 KRVKRILANRQSAARSKERKLRYIAELEHKVQTLQTEATTLSAQLTLLQRDSSGLTTQN 423 899*********************************************99999888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-18	361	425	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	6.1E-10	362	414	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.645	363	426	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.12E-11	365	415	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.5E-11	365	422	No hit	No description
CDD	cd14703	2.08E-24	366	415	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence Send to blast
MEGSDETGVM QRIESSFGNC SSSVNKQSSN NQIGINGQMQ NLSVTEVFNS NIISGKRPAG 60 IPPSHPHSHF IVPKIVPQQV GGTQNSAHSR SLSQSSFFSF DHLPPLSPTV FRESVAPVHG 120 SNEIVMEEKD GGLRGGGSGV HVSEGLPPRR RHRRSSSDVS LVFASMGQPS APQFMPKEKE 180 KDKPVQLVLK RESDWGGSGT GNADGGGERK SEGEVVDDLF SAYMNLDNLD ALNSSSLDDK 240 DMDSRASGTR TNDSSENEVE SGIGGNSHGE KRSKRSAPGD LGPTGRHFRS LSMDSFMGNL 300 NFSDESPKLS PSPGIQSAQH SPSNSFDENT NKFSVEFANS DFSPAELKKI MTSEKLAEIA 360 VSDPKRVKRI LANRQSAARS KERKLRYIAE LEHKVQTLQT EATTLSAQLT LLQRDSSGLT 420 TQNNELRFRL QSMEQQAQLR DALNEALTAE VHRLKLVSAD LRGESASNCM PQGPQQGMSN 480 NQMLQMQRSQ YNMYQLQQHQ QHHNNQKQQQ TQEEPQQNQS TQCQQDAEAP KI

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence Send to blast

MEGSDETGVM QRIESSFGNC SSSVNKQSSN NQIGINGQMQ NLSVTEVFNS NIISGKRPAG  60
IPPSHPHSHF IVPKIVPQQV GGTQNSAHSR SLSQSSFFSF DHLPPLSPTV FRESVAPVHG  120
SNEIVMEEKD GGLRGGGSGV HVSEGLPPRR RHRRSSSDVS LVFASMGQPS APQFMPKEKE  180
KDKPVQLVLK RESDWGGSGT GNADGGGERK SEGEVVDDLF SAYMNLDNLD ALNSSSLDDK  240
DMDSRASGTR TNDSSENEVE SGIGGNSHGE KRSKRSAPGD LGPTGRHFRS LSMDSFMGNL  300
NFSDESPKLS PSPGIQSAQH SPSNSFDENT NKFSVEFANS DFSPAELKKI MTSEKLAEIA  360
VSDPKRVKRI LANRQSAARS KERKLRYIAE LEHKVQTLQT EATTLSAQLT LLQRDSSGLT  420
TQNNELRFRL QSMEQQAQLR DALNEALTAE VHRLKLVSAD LRGESASNCM PQGPQQGMSN  480
NQMLQMQRSQ YNMYQLQQHQ QHHNNQKQQQ TQEEPQQNQS TQCQQDAEAP KI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010670890.1	0.0	PREDICTED: transcription factor VIP1
TrEMBL	A0A0K9QB30	0.0	A0A0K9QB30_SPIOL; Uncharacterized protein
STRING	XP_010670890.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-80	bZIP family protein