PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bostr.7867s1253.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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Family | bZIP | ||||||||
Protein Properties | Length: 446aa MW: 48877 Da PI: 9.8019 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.3 | 3.8e-14 | 365 | 414 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+k+ e+ + Bostr.7867s1253.2.p 365 RRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIME 414 69*************************************99876555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.4E-14 | 361 | 426 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 363 | 408 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.32E-26 | 365 | 419 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 365 | 421 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-10 | 365 | 417 | No hit | No description |
Pfam | PF00170 | 7.4E-12 | 365 | 421 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 368 | 383 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence Send to blast |
MGSRTNFKNF VDGLSDEAAI NPKQPMMGSS LPLTRQNSVF SLTFDEFQNS WGGGIGKDFG 60 SMNMDELLKN IWTAEESHSM MGNNTSFNNI NNGNNGNTVI NNNGGLSVGM GGESGGGFFT 120 GGSLQRQGSL TLPRTISQKT VDDVWKELMK EDDIGNSAGN GGTNGIPQRQ QTLGEMTLEE 180 FLARAGVVRE EPQPVESVNN FNGGFYGFGS NAGLGTARNG IGANQPHNFG GNGAAVRPDQ 240 LTTQTQPLHM QQPQQLIQKQ ERPFPKQTTI AFSNTVDAVN RSQPATQFQE VKPSILGIRD 300 HPMNNNLLQA VDFKTGVTVA AVSPGSQMSP DLTPKSALDA SLSPVPYMFG RVRKTGAVLE 360 KVIERRQKRM IKNRESAARS RARKQAYTME LEAEIAQLKE LNEELQKKQV EIMEKQKNQL 420 LEPLRQPWRM GCKRQCLRRT LTGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bostr.7867s1253.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF093546 | 0.0 | AF093546.1 Arabidopsis thaliana clone 11 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds. | |||
GenBank | AK175851 | 0.0 | AK175851.1 Arabidopsis thaliana mRNA for abscisic acid responsive elements-binding factor (ABRE/ABF3), complete cds, clone: RAFL22-47-B14. | |||
GenBank | AY054605 | 0.0 | AY054605.1 Arabidopsis thaliana Unknown protein (F17I5.190:F17I5.200) mRNA, complete cds. | |||
GenBank | AY081467 | 0.0 | AY081467.1 Arabidopsis thaliana unknown protein (F17I5.190:F17I5.200) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006284949.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X1 | ||||
Refseq | XP_023635587.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X1 | ||||
Refseq | XP_023635588.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X1 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | R0F7H3 | 0.0 | R0F7H3_9BRAS; Uncharacterized protein | ||||
STRING | Bostr.7867s1253.1.p | 0.0 | (Boechera stricta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 0.0 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Bostr.7867s1253.2.p |