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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bostr.0568s0167.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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| Family |
GRAS |
| Protein Properties |
Length: 427aa MW: 47523.2 Da PI: 4.7701 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.0568s0167.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 307.8 | 2.5e-94 | 25 | 416 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fse 86
++lLl+cA+a++s+d++laq++++ l++laspdgd++qRla+ f++AL +r + s ++ l++ +t+ s+++l+ +++ f++
Bostr.0568s0167.1.p 25 EQLLLHCANAIESNDATLAQQIIWVLNNLASPDGDSTQRLASSFLRALISRAVT-KSFAFAFLSVAATAAFVSKKTLHCFSVielaeFVD 113
79************************************************9998.56666666777777666777777776677799*** PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg.....skeeleetgerLakfA 169
++P+++f++++aN aIl+aveg + vHi+D++ ++++Q p+L+++ a++ ++pp l++T+++s +++ ++ee+g++L +fA
Bostr.0568s0167.1.p 114 LTPWHRFGFIAANAAILDAVEGYSSVHIVDLSFTHCMQIPTLIDSVANKLhkQPPPLLKLTVIASDDESplpplLGISYEELGSKLVNFA 203
***********************************************988778899*********8888999888999************ PP
GRAS 170 eelgvpfefnvl...vakrledleleeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
++ ++ +ef+++ +++ l++l +e+Lr +p +Eal+Vn++++lh++++e+++++ +r+ +Lk +++l+P++v++++++ad +s+++
Bostr.0568s0167.1.p 204 TTRNIAMEFRIIsssYSDGLSSL-IEQLRNDPfvfNEALVVNCHMMLHYIPEETLTSNPPRSVFLKELRDLNPTIVTLIDEDADFTSTNL 292
***********966555566666.9***************************************************************** PP
GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
r+ +y++ +d+ ++ l + se+r+++E+ ++++i nv+a+egaer+er e +++W er++ea F v ++e aa++ak++l++
Bostr.0568s0167.1.p 293 ISRLRCLYNYMWIPYDTADMFLTHGSEQRQWYEAD-VSWKIDNVIAKEGAERVERLEPKSRWFERMREAKFAGVGFGEAAATEAKTMLEE 381
***********************************.9***************************************************** PP
GRAS 344 vk.sdgyrve....eesgslvlgWkdrpLvsvSaW 373
++ ++g++ + ++ + +vl+Wk++++v++SaW
Bostr.0568s0167.1.p 382 HAtGWGMKRDvdddDDVERFVLTWKGHSVVFASAW 416
**9999887754444478899************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MNTTRPVLPG FSSSKSLCGD ANCMEQLLLH CANAIESNDA TLAQQIIWVL NNLASPDGDS 60
TQRLASSFLR ALISRAVTKS FAFAFLSVAA TAAFVSKKTL HCFSVIELAE FVDLTPWHRF 120
GFIAANAAIL DAVEGYSSVH IVDLSFTHCM QIPTLIDSVA NKLHKQPPPL LKLTVIASDD 180
ESPLPPLLGI SYEELGSKLV NFATTRNIAM EFRIISSSYS DGLSSLIEQL RNDPFVFNEA 240
LVVNCHMMLH YIPEETLTSN PPRSVFLKEL RDLNPTIVTL IDEDADFTST NLISRLRCLY 300
NYMWIPYDTA DMFLTHGSEQ RQWYEADVSW KIDNVIAKEG AERVERLEPK SRWFERMREA 360
KFAGVGFGEA AATEAKTMLE EHATGWGMKR DVDDDDDVER FVLTWKGHSV VFASAWAPIN 420
GVADLI*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB007645 | 0.0 | AB007645.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
