PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Brast07G229500.2.p

Organism

Brachypodium stacei

Taxonomic ID

1071399

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Family

bZIP

Protein Properties

Length: 281aa MW: 28973.3 Da PI: 9.8313

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Brast07G229500.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.3	1.6e-08	174	216	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L aeN+ L++e+e+l+ +++l e+ Brast07G229500.2.p 174 RSRKKMRLPEVQQLVRSLAAENDGLREEVESLQRACSALSREN 216 99***********************************998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.5E-6	173	213	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MAEVDEEPCL AVLAEAEAAG IICSLRAGDL AGWTPPWTTT GGPPSEALVA EPAKEEEGEA 60 GGGWPAVTRG KRSRRRSPSG GSAADGKTGK KKKRRRRARG SPASPLDCGA ASASASASGA 120 STSGAEDGAF CSPEPPPAAA VAQAVPSAAQ ASSAKVCSAG VRRPPPRPTA AGPRSRKKMR 180 LPEVQQLVRS LAAENDGLRE EVESLQRACS ALSRENGTLE TRLEHSSSKR KRTVSEEQDR 240 RRQRKPTLQL AAEHRGAPNG FVLPDLNIPA AAPDDVGSAP *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	95	RRRSPSGGSAADGKTGKKKKRRR
2	89	94	KKKKRR
3	90	95	KKKRRR
4	90	96	KKKRRRR
5	91	96	KKRRRR
6	173	179	RSRKKMR
7	238	245	DRRRQRKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Brast07G229500.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003560357.1	3e-98	trinucleotide repeat-containing gene 18 protein
TrEMBL	I1GVI6	8e-97	I1GVI6_BRADI; Uncharacterized protein
STRING	BRADI1G30750.1	1e-97	(Brachypodium distachyon)

Link Out ? help Back to Top
Phytozome	Brast07G229500.2.p