PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G183800.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 401aa    MW: 43943 Da    PI: 8.066
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G183800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like57.23.6e-18161210455
             G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         + W++eL e+F++ave+LGGs  AtP +il +m+vkg+t ++++SHLQk+R 
  Brast07G183800.1.p 161 VTWSTELQEKFLQAVESLGGS--ATPGRILWHMDVKGVTSQKIASHLQKHRQ 210
                         58*****************97..8**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.35E-131129IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.2E-123127No hitNo description
PROSITE profilePS5011015.9955125IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.2E-56115IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.14E-67114No hitNo description
PROSITE profilePS5129410.072155213IPR017930Myb domain
SuperFamilySSF466892.87E-10160214IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-16161214IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-16161211IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MGNPSILVLD HDPVSLSTIS KTLAKFNFKV LPFQTAGNAL DSFKRGFAED EELDLVLAEV  60
HLGNMTVGTS VLFDYILNEL QVPLITMCAY GDEEALSQCM PLGACFNVLK PLDPPTFNIL  120
VVKAMEHRCR RVIPEGSSIL KKTKEPGAWE PHEYSKKLGW VTWSTELQEK FLQAVESLGG  180
SATPGRILWH MDVKGVTSQK IASHLQKHRQ KLKQEQDQQQ DANMKLVADV ITSAYGATRT  240
KSNNHLTTTQ MKVTPGAAPA IRAQVEKSSV KAEVSNTNTR SSVWDRYSKS LQDRKKSVGD  300
RYQPKSFFIP YKQEFLPMPS KPITKYGGIE NITPYASGQK GLGTPITSLL HQLKGNSYTE  360
AAGNNGNMES FTLQEDNVNE VYAAATCAHG GGGCSEQCAA *
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast07G183800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010227447.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_010227448.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_014754517.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_014754521.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_024312267.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_024312268.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_024312269.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_024312270.10.0uncharacterized protein LOC104581506 isoform X1
RefseqXP_024312271.10.0uncharacterized protein LOC104581506 isoform X1
TrEMBLA0A0Q3JIC60.0A0A0Q3JIC6_BRADI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.14e-11response regulator 11