 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Brast06G070200.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
| Family |
GRAS |
| Protein Properties |
Length: 471aa MW: 50133.9 Da PI: 6.0119 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Brast06G070200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 290.5 | 4.5e-89 | 61 | 467 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalkl..fsevs 88
++lL++cA a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL +r +r + ++ka+ ++ +++ +s+++++a++l f++++
Brast06G070200.1.p 61 EQLLVHCAGAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVSRASR-TGACCKAVtaAVAAAAAAESVHRFTAVELagFVDLT 150
79***************************************************9.5555555522333334445888888888899***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..........skeeleetgerLakfA 169
P+++f++++aN aIl+a+eg vH++D++ ++++Q p+L++ LasR+egpp lR+T+ + ++ + +++ee+g +L fA
Brast06G070200.1.p 151 PWHRFGYMAANAAILDAAEGFPVVHVVDLGTTHCMQIPTLIDLLASRAEGPPILRLTVADVSSFStssssspppvLDTSYEELGAKLVGFA 241
*********************************************************9887554467888888888899************ PP
GRAS 170 eelgvpfefnvl.......vakrledleleeLrvkp....gEalaVnlvlqlhrll............desvsleserdevLklvkslsPk 237
++ +v+++f+v+ a+ l++l++++L + Eal+Vn+++ lh ++ ++s++ s r+ +Lk ++sl+P
Brast06G070200.1.p 242 RSRNVSMDFRVVrtspadaFASLLDALRMQQLVSSGssscSEALVVNCHMLLHAVPdetagsvittslSHSQQPVSLRTVLLKSLRSLEPA 332
************9888877777888889999954446778****************99999999998844444455677************ PP
GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
+vvv+e++ad ++ + + r+ a+++ + +d++++ lpr+ +r+++E+e ++++++nvva+eg +r+er+e ++W +r+++aGF++v
Brast06G070200.1.p 333 LVVVAEEDADFTACDVVGRLRAAFNFLWIPYDAVDTFLPRQGsAQRRWYEAE-VAWKVENVVAQEGVDRVERQEGRARWGQRMRAAGFRAV 422
***************************************9876999999*99.9************************************* PP
GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
l+e+aa +++++l++++ g+ ++ e++ l+l+Wk++++v++SaW
Brast06G070200.1.p 423 GLGEDAAGEVRTMLNEHA-AGWGMKREDDDLLLTWKGHNVVFASAW 467
******************.889999********************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MMQFTHAAVT APPLHHNGAH GLGLGLLLDV GAPRPWPTTT PSSSSSSKIS LGNLNSAGCM 60
EQLLVHCAGA IEANDATLTQ QILWVLNNIA PADGDSNQRL TAAFLCALVS RASRTGACCK 120
AVTAAVAAAA AAESVHRFTA VELAGFVDLT PWHRFGYMAA NAAILDAAEG FPVVHVVDLG 180
TTHCMQIPTL IDLLASRAEG PPILRLTVAD VSSFSTSSSS SPPPVLDTSY EELGAKLVGF 240
ARSRNVSMDF RVVRTSPADA FASLLDALRM QQLVSSGSSS CSEALVVNCH MLLHAVPDET 300
AGSVITTSLS HSQQPVSLRT VLLKSLRSLE PALVVVAEED ADFTACDVVG RLRAAFNFLW 360
IPYDAVDTFL PRQGSAQRRW YEAEVAWKVE NVVAQEGVDR VERQEGRARW GQRMRAAGFR 420
AVGLGEDAAG EVRTMLNEHA AGWGMKREDD DLLLTWKGHN VVFASAWAPS *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
