PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G246200.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 353aa    MW: 39251.6 Da    PI: 7.5737
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G246200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.45.6e-072252491741
                         HHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeae 41 
                         A+rsR RK+++i+eLe++v++L+++
  Brast05G246200.1.p 225 AQRSRVRKLQYIAELERRVQALQTQ 249
                         89********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-5214273IPR004827Basic-leucine zipper domain
CDDcd147031.54E-14215265No hitNo description
SuperFamilySSF579599.57E-6224267No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-7225267No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MMANGRLQKQ ALLPPRIPFP AAPAAAASPS PQAELGPIAR PRDAHHRQGH QRTSSESVLV  60
DEQPSWLDDL LDEPDSPARP HGRPGHRRSS SDSFTLFDGA AAAAASSAGT YDNVFDGMRG  120
GGQASSWGRA PEFFPEQNSF GRPQPQGQGL PWDPRQMFLQ DGGMPLPVRE KNVMHHAAVP  180
NVVDMKGHVD SAHDQMIGAE RNEGDAHLRH SQSEADTKRA KQQYAQRSRV RKLQYIAELE  240
RRVQALQTQG IEVSAEMDFL GQQNIMLDLE NKSLKQRLES LSQEHVIKRV QQEMFEREIG  300
RLRSLFQQQQ QQQQAPTHSR SNSRDLDSQF ANMSLKHNDP NSGRDAVPGL RI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G246200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578800.10.0uncharacterized protein At4g06598
TrEMBLI1ITQ30.0I1ITQ3_BRADI; Uncharacterized protein
STRINGBRADI4G40540.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-51bZIP family protein