PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G095300.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family ERF
Protein Properties Length: 315aa    MW: 34766.7 Da    PI: 4.4206
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G095300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.9e-1476127156
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                         s+y+GVr++  +g+W+AeIrd +     r  r ++g+f ++e Aa+a+ a r++++ e
  Brast05G095300.1.p  76 SRYPGVRQRA-WGKWAAEIRDpV-----RkIRKWIGTFSSEEAAAEAYKAKRNQYRAE 127
                         79*****998.**********44.....55************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.69E-1376109No hitNo description
PfamPF008472.2E-876127IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-1476127IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-1777123IPR001471AP2/ERF domain
PROSITE profilePS5103217.7877134IPR001471AP2/ERF domain
SMARTSM003805.4E-1077126IPR001471AP2/ERF domain
PRINTSPR003671.2E-67889IPR001471AP2/ERF domain
PRINTSPR003671.2E-6100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MLQNEMTPSS RRVRISCSDP DATDSSDDDV QNAKKEKRMI LEVVVPMNIS GNLKSRKTLV  60
SGGTKKSKGM EKEPTSRYPG VRQRAWGKWA AEIRDPVRKI RKWIGTFSSE EAAAEAYKAK  120
RNQYRAEMLA MKSQSSAPDH EDSSSSATIS NEMLGIKSRS SASYHAALSS SATVSCVSSS  180
VSFDQQSQEE VRKVASVEIA PDTVDESLLN FSTTPSDKDI SVDAFLGQIN ELPISGYVCP  240
TDELSLDDFS RLADVFAVND FVVATDEPLD DDYIGLADIS HLQMPFTEPK FELDAELDWN  300
CFDFASLERE LEEL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G095300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238049.10.0ethylene-responsive transcription factor ERF118
RefseqXP_010238050.10.0ethylene-responsive transcription factor ERF118
RefseqXP_014757283.10.0ethylene-responsive transcription factor ERF118
RefseqXP_024310935.10.0ethylene-responsive transcription factor ERF118
TrEMBLI1IPB10.0I1IPB1_BRADI; Uncharacterized protein
STRINGBRADI4G27850.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-13ERF family protein