PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast03G251600.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family GeBP
Protein Properties Length: 432aa    MW: 46877.1 Da    PI: 10.3293
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast03G251600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.21.4e-29175272297
              DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90 
                         ++ r+ws +Dei++L+ li+++ak+g+   + +++ ++++++++++++++s++ql++K+rrLK+Kf+  v++ak+g+ep++ ++hd++ +e
  Brast03G251600.1.p 175 RPPRVWSPQDEITILRSLISYRAKKGVlpASNQETGKLHDQIRGKLNAEASTTQLTDKVRRLKHKFRLLVDRAKEGREPELPTAHDRDLYE 265
                         578************************777778********************************************************** PP

              DUF573  91 lskkiWg 97 
                         l kk+Wg
  Brast03G251600.1.p 266 LGKKVWG 272
                         ******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.3E-28177272IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MAPKRPAASP AASASASDGE ADPPHQDHHS PSPSPSPSPS RSRSKTPPPN LHPAAAALSS  60
TPISAAVDRA AAAASASASE SEGRVPSPRR SRERSPRLHS DSDNSPAASD EDNRTPPRRS  120
APRSSLIDPS DVRPISSRPM DSAARRASQR RSKRPRNTLL ALPRSSVLSL DRNKRPPRVW  180
SPQDEITILR SLISYRAKKG VLPASNQETG KLHDQIRGKL NAEASTTQLT DKVRRLKHKF  240
RLLVDRAKEG REPELPTAHD RDLYELGKKV WGVKTGGAGS GGGRAYENNE VAESDEEQRS  300
GESDEDMEGD SDDQDRSNNR RPKAVPVSNG IVNAIAIGGR TRNGNSSGKG VVAKGKDMYP  360
YLWEAVDELS KEHPSGTVFR KAFDVLEGPS ALAMEEKLEK FKHSEIRQQL HRMDLMKETV  420
KMVLDALEGS N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast03G251600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574606.10.0STOREKEEPER protein
TrEMBLI1I7R30.0I1I7R3_BRADI; Uncharacterized protein
STRINGBRADI3G37930.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-14DNA-binding storekeeper protein-related transcriptional regulator