PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast02G251300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 136aa MW: 14944.7 Da PI: 4.0784 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 25.6 | 2.7e-08 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v gLt ++kSHLQkYR Brast02G251300.1.p 1 MGVTGLTTWNIKSHLQKYRE 20 99*****************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.9E-6 | 1 | 19 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MGVTGLTTWN IKSHLQKYRE GCGLGAKPPL DVLDTASPSE AAHDRTSETE VAMNNNEAMT 60 EMEMVNNLLM GDMEMAETDF SAEKVQMVEN ELMNEIQLIK HGSQYSQIPI DEYVYDLGKY 120 PFDKDSSGLA SSSSL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast02G251300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010231922.1 | 8e-78 | protein PHR1-LIKE 2-like isoform X1 | ||||
Refseq | XP_010231927.1 | 8e-78 | protein PHR1-LIKE 2-like isoform X1 | ||||
Refseq | XP_024310546.1 | 3e-78 | protein PHR1-LIKE 2-like isoform X2 | ||||
TrEMBL | I1GPW8 | 8e-77 | I1GPW8_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G13422.1 | 1e-77 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15499 | 12 | 16 |
Link Out ? help Back to Top | |
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Phytozome | Brast02G251300.1.p |