PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Brast02G163500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 23387.3 Da PI: 9.9563 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.2 | 4e-14 | 145 | 187 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r +r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN+ L++ Brast02G163500.1.p 145 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENELLRS 187 6899**********************************99986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-11 | 141 | 213 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.082 | 143 | 187 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.4E-12 | 145 | 187 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 9.05E-21 | 145 | 186 | No hit | No description |
SuperFamily | SSF57959 | 3.06E-11 | 145 | 187 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-14 | 145 | 187 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 148 | 163 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence Send to blast |
MGTQAMSSGG AISRQGSVCS LTLSEVEGQL HGVNLDDLLR TAGSARKTAD EVWPDIHGGR 60 APGQMTLEDF LSKPVGDARW AEQYNPAPPA QGHSVGRPLP RPLGVGAGPV LDALLCHDGA 120 AAPFNGRKRA AEAGLGGPGE KTVERRKKRM IKNRESAARS RARKQAYTNE LENKISRLEE 180 ENELLRSYKA FEPVVHYVPQ EEPKNQLRRR NSASF* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 126 | 147 | RKRAAEAGLGGPGEKTVERRKK |
2 | 126 | 148 | RKRAAEAGLGGPGEKTVERRKKR |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Brast02G163500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK361423 | 5e-90 | AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_003558020.1 | 1e-132 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9C5Q2 | 3e-34 | AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
Swissprot | Q9LES3 | 5e-34 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A0Q3LFY5 | 1e-130 | A0A0Q3LFY5_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G63840.1 | 1e-127 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G41070.3 | 3e-31 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Brast02G163500.1.p |
Publications ? help Back to Top | |||
---|---|---|---|
|