PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009137653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | NZZ/SPL | ||||||||
Protein Properties | Length: 266aa MW: 28812.8 Da PI: 7.5938 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 266.1 | 1.4e-81 | 1 | 266 | 1 | 314 |
NOZZLE 1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaa 94 ma+slffm dq npne+lrnt+lv n s ei te +++s gr pgs t++qk kk lrgmgva+ler +ieee k++v a g + XP_009137653.1 1 MAASLFFMPRDQ----NPNEFLRNTYLV-NDSSEIPTEpPQNSHGRIPGSETGNQKPKKQVLRGMGVARLERLRIEEEWKNMVLAQGGRGA---- 86 9**********9....5**********9.999******999********************************************999876.... PP NOZZLE 95 isntatrlpvpvdrgvvlqgfps.slgssrilcgg...vgsgqvmidpvispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldgdq 185 s +atr p d+gvvlqgfps g+ + +gg gsgq+ pv spwg v ts+ he ss++ pq+yn s + cd+c+k++r++ XP_009137653.1 87 -SPNATRSP---DPGVVLQGFPSyGTGGHNMSVGGytrNGSGQI---PVYSPWGVVGTST--HEPSSVPTPQVYNPSNIH-CDACYKRQRINE-- 169 .6789****...***********768889999999444599998...9**********98..*************99888.*********964.. PP NOZZLE 186 nnvvrsngggfskytmipppmngydeyllqsdhhqrsqgflydqriaraasvsaasasinpyfneatnltgsreefgsvlegnprngsrgvkeye 280 vr+ngggf + +l++d qrsqgf+yd+riar + ++as+ gs+eefgs prng++ vkey+ XP_009137653.1 170 --EVRANGGGFPH--------------FLPPD--QRSQGFFYDHRIARYPASPSAST-----------NQGSMEEFGSG---SPRNGTGDVKEYQ 232 ..47*******64..............58899..**************984444443...........369******96...************* PP NOZZLE 281 ffpgkydervskvakvaslvgdcspn..tidlslkl 314 ffpg +++ v v+++vgdcsp+ tidl+lkl XP_009137653.1 233 FFPGSDGNK--SVSSVSTSVGDCSPDtsTIDLTLKL 266 ****87765..466799********9889*****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08744 | 1.5E-81 | 3 | 266 | IPR014855 | Plant transcription factor NOZZLE |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MAASLFFMPR DQNPNEFLRN TYLVNDSSEI PTEPPQNSHG RIPGSETGNQ KPKKQVLRGM 60 GVARLERLRI EEEWKNMVLA QGGRGASPNA TRSPDPGVVL QGFPSYGTGG HNMSVGGYTR 120 NGSGQIPVYS PWGVVGTSTH EPSSVPTPQV YNPSNIHCDA CYKRQRINEE VRANGGGFPH 180 FLPPDQRSQG FFYDHRIARY PASPSASTNQ GSMEEFGSGS PRNGTGDVKE YQFFPGSDGN 240 KSVSSVSTSV GDCSPDTSTI DLTLKL |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed during microsporogenesis and megasoprogenesis (PubMed:10465788). Expressed during ovule development (PubMed:25378179). {ECO:0000269|PubMed:10465788, ECO:0000269|PubMed:25378179}. | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in flower buds (PubMed:10465788, PubMed:10500234). Not found in leaves, siliques and stems (PubMed:10465788). Detected in rosette leaves, stem tissue and seedlings (PubMed:10500234). {ECO:0000269|PubMed:10465788, ECO:0000269|PubMed:10500234}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator of sporocyte development (PubMed:10465788). Acts as an adapter-like transcriptional repressor recruiting TPL/TPR corepressors to inhibit TCP transcription factors (PubMed:25378179). Required for nucellus and embryo sac development (PubMed:10500234). Plays a central role in patterning both the proximal-distal and the adaxial-abaxial axes during ovule development (PubMed:12183381). Involved in establishing the prospective chalaza of the ovule and in controlling the cell number and the length of the funiculus, and is required for the development of the integuments (PubMed:10976054). Required, with BEL1, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). Involved in controlling stamen identity (PubMed:19726570). May also regulate the morphology of lateral organs by repressing auxin production (PubMed:18557819). {ECO:0000269|PubMed:10465788, ECO:0000269|PubMed:10500234, ECO:0000269|PubMed:10976054, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:18557819, ECO:0000269|PubMed:19726570, ECO:0000269|PubMed:22786869, ECO:0000269|PubMed:25378179}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009137653.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by the transcription factor AGAMOUS (PubMed:15254538). Regulated by ATXR3/SDG2 via chromatin methylation (PubMed:21037105). Triggered by TGA9 AND TGA10 in anthers (PubMed:20805327). {ECO:0000269|PubMed:15254538, ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:21037105}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009137652.1 | 0.0 | PREDICTED: protein SPOROCYTELESS-like isoform X1 | ||||
Refseq | XP_009137653.1 | 0.0 | PREDICTED: protein SPOROCYTELESS-like isoform X2 | ||||
Swissprot | O81836 | 1e-75 | SPL_ARATH; Protein SPOROCYTELESS | ||||
TrEMBL | A0A078JD17 | 0.0 | A0A078JD17_BRANA; BnaA03g58770D protein | ||||
TrEMBL | M4DRB3 | 0.0 | M4DRB3_BRARP; Uncharacterized protein | ||||
STRING | Bra019056.1-P | 0.0 | (Brassica rapa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27330.1 | 5e-78 | sporocyteless (SPL) |