PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009127764.1 | ||||||||
Common Name | WRKY36 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | WRKY | ||||||||
Protein Properties | Length: 362aa MW: 40556.2 Da PI: 7.3001 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 84.9 | 7.5e-27 | 187 | 246 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers.aedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ k ++ pr+YYrC+++ +Cpv+k+v+r+ ++d+++ +tYeg+H+h+ XP_009127764.1 187 NDGCQWRKYGQKTAKTNPLPRAYYRCSMSsNCPVRKQVQRCgEDDTSAYMTTYEGNHDHP 246 8***************************99**********934578899**********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.8E-28 | 171 | 248 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.478 | 181 | 248 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-24 | 182 | 248 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.0E-33 | 186 | 247 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.3E-25 | 187 | 246 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MIKEEIDSCV HPLDGGMAES DKEVELDATK AKVDKVREEN EKLKLLLSTV RTEYNSLQMH 60 VSNVIRQQHE ASMKLDDNGH EDLDVDISLT LGRSEQKISK KEEQVKKIIA ENNSIKNKEG 120 SEKKRWAHGL AFRIQSFEDP DTNQTMRKDV KTARNEDQHE LLEGHEQPGL KKTRVCVKAP 180 CEDPSINDGC QWRKYGQKTA KTNPLPRAYY RCSMSSNCPV RKQVQRCGED DTSAYMTTYE 240 GNHDHPLPME ATHMAAGTSA AASLLQSGAS SSASLSHFFP FHHFSVSTTN SHPTVTLDLT 300 QPNYDPNQLP NYPLSSSSLS FSSSGRPSPS KSHTLSFSGL RSQAPMNTYS HLSHHTRLFG 360 RQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-18 | 186 | 248 | 14 | 74 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009127764.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF430052 | 0.0 | KF430052.1 Brassica rapa WRKY transcription factor 36 (WRKY36) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009127764.1 | 0.0 | PREDICTED: probable WRKY transcription factor 36 isoform X1 | ||||
Refseq | XP_013717333.2 | 0.0 | probable WRKY transcription factor 36 isoform X2 | ||||
Swissprot | Q9CAR4 | 1e-155 | WRK36_ARATH; Probable WRKY transcription factor 36 | ||||
TrEMBL | A0A398ADR3 | 0.0 | A0A398ADR3_BRACM; Uncharacterized protein | ||||
STRING | Bra007884.1-P | 0.0 | (Brassica rapa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69810.1 | 1e-128 | WRKY DNA-binding protein 36 |
Link Out ? help Back to Top | |
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Entrez Gene | 103852616 |
Publications ? help Back to Top | |||
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