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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009127236.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
GRAS |
Protein Properties |
Length: 579aa MW: 62282.3 Da PI: 5.91 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009127236.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 351.7 | 1.1e-107 | 200 | 579 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
+++++e+A av++g++e a +lLa +s + +++ ++ +Rl+ +++ AL+ r++ +e + +p +++e +e+l +++l++e+sP++k++++
XP_009127236.1 200 RQTVMEIAAAVAEGKTEIAAELLACVSPTPNQKTNSEERLVNFMVTALRLRINPAEKESRAPPSPATATELYGKEHLISTQLLYELSPCFKLGFM 294
6889*************************************************9555555444555555555*********************** PP
GRAS 97 taNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
+aN aIl+a+ + +H++Df+i+ G+Q+++Ll+aL++R+ ++p ++iT+v + +g +++l+++g+rL+++ ++lgv+++f+v+++
XP_009127236.1 295 AANLAILDAAGDNhdgggVLMHVVDFEIGDGGQYVNLLHALSTRRsgdDKPLVVKITAVTN--HGGERRLKAVGDRLSQLGDRLGVSLRFKVVAS 387
**********99977754567*********************99966334559********..77***************************888 PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
rl d++ e+L + p+E laVnl+++l+r++desv++e++rd++L+ vk+l+P+vv++veqe++ n+++Fl r++ea+ +y al+ds+e+++++
XP_009127236.1 388 LRLGDISRESLGCGPDEPLAVNLAFKLYRVPDESVCMENPRDALLRRVKGLEPRVVTLVEQEMNSNTAPFLGRVSEACACYGALLDSVESSVASS 482
8********************************************************************************************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvS 371
+ +r+kvE+ +gr++ n+vaceg +r+er+e ++kWr+r+++aGF+ +p+sek+a+++k+ l + + g++v+e++g +++gW++r+L ++S
XP_009127236.1 483 NLDRAKVEEG-IGRKLINAVACEGIDRIERCEVFGKWRMRMSMAGFELMPVSEKIAESMKSRLGNGNivHSGFTVKEDDGGVCFGWMGRTLAVAS 576
**********.****************************************************998887899*********************** PP
GRAS 372 aWr 374
aWr
XP_009127236.1 577 AWR 579
**8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 579 aa
Download sequence Send
to blast |
MVSGFPSGGG DGRSTPGGFG TVVNNNPQPT YRSQSPGIFL DQTGNRFSGG KRTLADFQAA 60 QQQQAAVNAF LLRSVKPRTF QNLQSPTIGL TSVNDMGLFG GSSQTQHQTD LVGIRMGYGS 120 SIEPVQNLNR VEDSKNMLSS SLRELEKQLL EDDDESDAQG GGDDVSTITH SNSDWLHRVL 180 TPVLSSSPSS ASSPSTTCSR QTVMEIAAAV AEGKTEIAAE LLACVSPTPN QKTNSEERLV 240 NFMVTALRLR INPAEKESRA PPSPATATEL YGKEHLISTQ LLYELSPCFK LGFMAANLAI 300 LDAAGDNHDG GGVLMHVVDF EIGDGGQYVN LLHALSTRRS GDDKPLVVKI TAVTNHGGER 360 RLKAVGDRLS QLGDRLGVSL RFKVVASLRL GDISRESLGC GPDEPLAVNL AFKLYRVPDE 420 SVCMENPRDA LLRRVKGLEP RVVTLVEQEM NSNTAPFLGR VSEACACYGA LLDSVESSVA 480 SSNLDRAKVE EGIGRKLINA VACEGIDRIE RCEVFGKWRM RMSMAGFELM PVSEKIAESM 540 KSRLGNGNIV HSGFTVKEDD GGVCFGWMGR TLAVASAWR
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |