PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013637770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 384aa    MW: 40743.4 Da    PI: 5.6722
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013637770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.41e-20277339163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrk++NRe+ArrsR+RK+ae++eL++++++L +eN +L++e+++l+ + ++l +e+
  XP_013637770.1 277 ERELKRQRRKESNRESARRSRLRKQAECDELAQRADVLNGENASLREEINKLRSQHEELVAEN 339
                     89******************************************************9998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.1E-29199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-35138255No hitNo description
Gene3DG3DSA:1.20.5.1708.6E-17269335No hitNo description
SMARTSM003381.9E-19277341IPR004827Basic-leucine zipper domain
PfamPF001703.7E-19277339IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.84279342IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-11280335No hitNo description
CDDcd147022.39E-23282332No hitNo description
PROSITE patternPS000360284299IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MGSSEVDKSG EENEPKTPPP PSSAPVTSQE PSSAVATPDW SGFQAYSPMP PPHGYVASSP  60
QPHPYMWGVQ HMMPPYGTPP HPYVAMYPPG GMYAHPSLPP GSYPYSPYAM PSPNGMAEAS  120
GNTGSGVEGD GKQAEAKEKL PIKRSKGSLG SLNMIIGKKN EAGKNSGASA NGACSKSAES  180
GSDGTSEGSD ANSQNDSGSR HNGKDGETAS DSAQGPPRNG SNQPVNQIVP VTPVSATGVP  240
APPTNLNMGM DYWSGHGTTV PGVVVDGSQS QTWVQDEREL KRQRRKESNR ESARRSRLRK  300
QAECDELAQR ADVLNGENAS LREEINKLRS QHEELVAENS ALKNRFSTVR SLEGVNLDGK  360
EQEPETSTRQ DVAETTRGSY NNSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293299RRSRLRK
2293300RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00173DAPTransfer from AT1G32150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013637770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3535050.0AK353505.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-47-I14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013637770.10.0PREDICTED: transcription factor HBP-1a
SwissprotQ84LG20.0BZP68_ARATH; bZIP transcription factor 68
TrEMBLA0A0D3CDL90.0A0A0D3CDL9_BRAOL; Uncharacterized protein
STRINGBo5g048660.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM37012557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-178basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]