PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_013636928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 615aa MW: 67218.4 Da PI: 5.1933 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42 | 2e-13 | 165 | 224 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e ++ r+++NRe+A+ sRqRKk ++eeLeekvk+L + ++L +++ e a+l+++ XP_013636928.1 165 EKRKRARLIRNRESAQLSRQRKKHYVEELEEKVKSLHSCITDLNGKISYFMAENATLRQQ 224 44556699************************************9999999999999887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.8E-16 | 162 | 227 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.0E-12 | 165 | 225 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.082 | 165 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-16 | 167 | 225 | No hit | No description |
SuperFamily | SSF57959 | 4.78E-12 | 167 | 225 | No hit | No description |
CDD | cd14704 | 6.38E-21 | 168 | 219 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 615 aa Download sequence Send to blast |
MAESITEEPP PPEFDPISTP PFAQFHNPSS DQTPIGELMS DLGFPIDADF ELTFDGMEDL 60 YLPAEDETFL LPDNASNQEQ FGDFTSESDD ERTSDQPTPL SSQGSDNCGS DVSEAVDQKV 120 KVEEASATKR KKEDTSDESR SSKFMRSGEE SAVVTGEEEE EEEDEKRKRA RLIRNRESAQ 180 LSRQRKKHYV EELEEKVKSL HSCITDLNGK ISYFMAENAT LRQQLGPPPP YPPMAYPWMH 240 CPPYMVKQQG GGQVPLIPIP RLKPQNPVKA KSKKSEAKTK KVASISFLGL VFCLFLFGAL 300 APVVNVNYGG ISGGVFYGSY RSNYVTDQVY NQHRNRILDT SRSNERDSAT ESSVPPGNGS 360 EPLVASLFVP RNDKLVKIDG NLIINSILAS EKALASESNE RKADGVVPKD HSLALPLPDV 420 GMIEDMAKHL VRTKAEKQKA LSSGSAETLK DSIKTKAASG EMQQWFREGV AGPMFSSGMC 480 TEVFQFDVSS TSGAIIPASA ATNVPSEHSK NATVTQRQKN RRTLRGLAIP LPGSDFNFTK 540 GHQRNSSSKE IKAASSMVVS VLVDPREGGD GDIDGMIGGP KSLSRVFVVV LQDSAKYVTY 600 SCVLPRPGAP HLVTT |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_013636928.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AY136295 | 0.0 | AY136295.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds. | |||
GenBank | BT000408 | 0.0 | BT000408.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_013636928.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Refseq | XP_013636929.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A0D3C5J6 | 0.0 | A0A0D3C5J6_BRAOL; Uncharacterized protein | ||||
STRING | Bo4g190610.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40950.1 | 0.0 | bZIP family protein |