PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013634791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 282aa MW: 31830 Da PI: 9.3662 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.7 | 4.4e-17 | 212 | 260 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe kv +Le+eN++L+ +l+e +k XP_013634791.1 212 RRQKRMIKNRESAARSRARKQAYTHELEIKVSSLEEENEKLR-RLKEVEK 260 79***************************************9.8887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.4E-15 | 205 | 254 | No hit | No description |
SMART | SM00338 | 9.7E-10 | 207 | 264 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.174 | 210 | 254 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.13E-10 | 212 | 254 | No hit | No description |
Pfam | PF00170 | 8.2E-14 | 212 | 254 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 8.81E-22 | 212 | 257 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 215 | 230 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MGSLRGNVEE PISQSLPRQN SLYSLKLHEV QNHLGSSAKP LGSMNFDELL KNVWSAEATN 60 QPREATEAGL SRQGSLALPR GLSKKTVEEV WREIQHDKNG SSGNPHGERI DNNNNNKQPT 120 LGEITLEDLL LKAGVVTETV LPQTVVNVAS NEPWVQYHHP QHQQQGFMPY PVCEMQEMVS 180 PMNMMMGDAP QAHGRKRVAP SGGDIVERVV ERRQKRMIKN RESAARSRAR KQAYTHELEI 240 KVSSLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTSSA SF |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013634791.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013634791.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1 | ||||
Swissprot | Q9C5Q2 | 1e-138 | AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
TrEMBL | A0A0D3BP08 | 0.0 | A0A0D3BP08_BRAOL; Uncharacterized protein | ||||
STRING | Bo4g012940.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1884 | 28 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 1e-127 | bZIP family protein |
Publications ? help Back to Top | |||
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