PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013634096.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family G2-like
Protein Properties Length: 350aa    MW: 39950 Da    PI: 6.4576
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013634096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.26.5e-3269122255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH rFv+ave+LGG+e+AtPk ++++m++kgL+++hvkSHLQ+YR+
  XP_013634096.1  69 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRS 122
                     8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.7E-2965123IPR009057Homeodomain-like
PROSITE profilePS5129412.27365125IPR017930Myb domain
SuperFamilySSF466891.97E-1467123IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2269124IPR006447Myb domain, plants
PfamPF002491.2E-970121IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MIPSMDGSGK TTDREEEEEE EEEEEEEEED GEGEGEGEGE ESKVSSNTTV EAEVGKKTKV  60
RPYVRSKVPR LRWTPDLHLR FVRAVERLGG QERATPKLVR QMMNIKGLSI AHVKSHLQMY  120
RSKKMDDQGQ AIGDNRHFIE SSTDRNIYKL SQLPMFRGYN TNHSHDSPFR YGSRFSNASL  180
WNSSSHETNR SLIDRTCLIR GSSVSNNIHG SEYWTNNRSF PNTYSSSVSN HLPKLRHNHQ  240
ERTNLATFNS IQGHSRTFEK FETGIEERTN HVYCNKTTGK RNASTSLDLD LSLKVRVPEE  300
TTLEETETAT TTDQTLSLSL CSWKKSRVIK TDEEDRTVKI GQASTLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-1670124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-1670124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-1670124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-1670124357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013634096.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013634096.10.0PREDICTED: putative two-component response regulator ARR20
RefseqXP_013705129.10.0myb family transcription factor PHL8-like
RefseqXP_013705130.10.0myb family transcription factor PHL8-like
TrEMBLA0A0D3BQY80.0A0A0D3BQY8_BRAOL; Uncharacterized protein
STRINGBo4g029640.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-171G2-like family protein