PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013631426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 464aa MW: 51705.4 Da PI: 7.4676 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.6 | 2.8e-13 | 85 | 146 | 2 | 63 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + k+e r+ +NRe+A sRqR+k ++eeLe+kvk+L++ ++L ++++ e a+l+ +v XP_013631426.1 85 DDEKKEARLVRNRESALLSRQRRKHYVEELEDKVKNLQSVITDLNSKVSYFASENATLRHKV 146 5679*********************************************9999999998775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.8E-12 | 84 | 148 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 86 | 143 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-12 | 87 | 146 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-15 | 88 | 146 | No hit | No description |
SuperFamily | SSF57959 | 1.77E-11 | 88 | 144 | No hit | No description |
CDD | cd14704 | 4.59E-18 | 89 | 140 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence Send to blast |
MAEPAVDSFY NSSFELGNSI SDLDVDFELT FEDLYFPSEG ESFFIPVEVE EKATTTCKTS 60 MTKRKNEIEE DTSRSYKYRR MDEEDDEKKE ARLVRNRESA LLSRQRRKHY VEELEDKVKN 120 LQSVITDLNS KVSYFASENA TLRHKVGPGK GMCWPPCGMY LGSGQVVPLL PIPRLKPQRS 180 VAKVKKTKKV ASVSVLGLLF CLFLFSALAP IIVNVSYGGR VLDVSVNNSS ELLVASLFVP 240 RNEKLVKLDG NLIIHSISAS EKDTASETKP ARRSSDSTNI RDMSKHLNTE KQKAFPSSCS 300 DDSKEKLNST TSNGEMQQWF REGVAGPMFS SGMCTEVFRF DVSSTSGAIR PASQQPKNTT 360 DTHKGKNNRR ILRGGHPLSD SNLTKDQNNS SKDNFSTTKP FPSMVVSVLT DPREEGSDED 420 INGVTGDTKS LSRLFIVVLV DSVKYVTYSC VLPRPEEVPH LVTT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 106 | RNRESALLSRQRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013631426.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013631426.1 | 0.0 | PREDICTED: bZIP transcription factor 49 | ||||
Refseq | XP_013742200.1 | 0.0 | bZIP transcription factor 49 | ||||
Swissprot | Q9LXX4 | 1e-150 | BZP49_ARATH; bZIP transcription factor 49 | ||||
TrEMBL | A0A078J5K3 | 0.0 | A0A078J5K3_BRANA; BnaCnng38290D protein | ||||
TrEMBL | A0A0D3BXH1 | 0.0 | A0A0D3BXH1_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6CGS5 | 0.0 | A0A3P6CGS5_BRAOL; Uncharacterized protein | ||||
STRING | Bo4g112860.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM20277 | 5 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56660.1 | 1e-132 | basic region/leucine zipper motif protein 49 |
Publications ? help Back to Top | |||
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