PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013626965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 333aa MW: 37850.6 Da PI: 6.3334 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.4 | 1.3e-12 | 251 | 302 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+R++a++ eLe + +L++eN +Lkk +ee +k+ XP_013626965.1 251 RRQRRMIKNRESAARSRARRQAYTVELELELNQLTEENLKLKKIVEENEKKR 302 79****************************************9999988875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-9 | 244 | 310 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.714 | 249 | 301 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.0E-11 | 251 | 303 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.88E-9 | 251 | 300 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-11 | 251 | 302 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 254 | 269 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0033613 | Molecular Function | activating transcription factor binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence Send to blast |
MPGLESETST FHVFNQDLQT QLQTYPQETA VEEHPPVGRQ NSIMSLTLDE IQMKSGKSFG 60 AMNMDELLAN MWMTVEENNG GGAGAQQDGE KPTIVPRQGS LSVPVPLCKK TVEEVWFEIQ 120 NGVQQPPPSS IAGQNPDEDN RRQQTLGEIT LEDFLVKAGV VQEPLKTTMK MSSSDFGYNP 180 EFGVGLHCQT QNNYGDNRTG YNENRPFYSG MGESSSCMTG KERSDQYLTG LNAFRIQKRI 240 IDGPPEILME RRQRRMIKNR ESAARSRARR QAYTVELELE LNQLTEENLK LKKIVEENEK 300 KRRQEVMNRS IQITKEKNGD KLRRIRRMAS AGW |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Could participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013626965.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013626963.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
Refseq | XP_013626964.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
Refseq | XP_013626965.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
Swissprot | Q8RYD6 | 0.0 | AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
TrEMBL | A0A0D3BGT7 | 0.0 | A0A0D3BGT7_BRAOL; Uncharacterized protein | ||||
STRING | Bo3g122120.1 | 0.0 | (Brassica oleracea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44460.1 | 1e-172 | bZIP family protein |