PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013617941.1
Common NameB19N3.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 176aa    MW: 20500.1 Da    PI: 10.3406
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013617941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.7e-1369127563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     +r+rr+ +NRe+ArrsR R k++i+eL++ v++L   N+ L +++ +l +   +  +e+
  XP_013617941.1  69 RRARRMVSNRESARRSRMRTKKQIQELQQQVEQLMILNHNLSEKVIHLLESNHQILQEN 127
                     79*******************************************99999999888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-1165129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.40467130IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.3E-1069125No hitNo description
PfamPF001706.7E-1069127IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-1069124No hitNo description
CDDcd147025.28E-770133No hitNo description
PROSITE patternPS0003607287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MESSVHRSHH CFDILEGMSP QGDHFNSAFL PNANFHVSLQ SLPPNSSTHN NNNRSHLNPT  60
IYHNEGLERR ARRMVSNRES ARRSRMRTKK QIQELQQQVE QLMILNHNLS EKVIHLLESN  120
HQILQENSQL KEKVSSFQLL MAEMQIPMRM DGSINDRVVN HLRGETLNRT NAFFGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013617941.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1496350.0AC149635.1 Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013617941.11e-126PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D3AY301e-125A0A0D3AY30_BRAOL; Uncharacterized protein
TrEMBLQ60D871e-125Q60D87_BRAOL; Putative bZIPtranscription factor protein
STRINGBo2g161130.11e-125(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.16e-59basic leucine-zipper 70