PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013613267.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 374aa    MW: 42331.9 Da    PI: 9.7369
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013613267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1223.4e-072432791753
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     A+rsR RK+++i eLe+ v++L+ae ++    l+ l+
  XP_013613267.1 243 AQRSRVRKLQYISELERTVQALQAEGSKVSADLDFLN 279
                     89***********************888777776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0069228291IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-5228302No hitNo description
CDDcd147032.41E-14235282No hitNo description
SuperFamilySSF579592.56E-5243285No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MASSKGTQSV KDLMHPGKNA LLPPKIPFPT VSAPYSEYIP LGSRHHGHKL NDEKPHHHHH  60
HQRTSSESDL VEEPPFWLDD LLNEPESPVR KCGHRRSSSD SYAYLDMANA KNISLTLQND  120
FSYRNTGSST QRGGVHELDW NHNAQGAAFY SDSNFLKQTN RQRDSLVVAS GPRPSWQPFT  180
RESVGGKHMG SSSYMPQEAP ETKNYAKTLS HDAKKFSPEQ KNSNAQPVTI DADNTRRAKQ  240
QFAQRSRVRK LQYISELERT VQALQAEGSK VSADLDFLNQ RNLILSMENK ALKQRLESIA  300
QEKLIKQMEQ ELLEKEIGRL RALYQQQQQT QQPPASHKRA SSKDLDSQFS SLSLNSKDSN  360
SSRDSVSVTS QFHF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013613267.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013613266.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_013613267.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A0D3E5M90.0A0A0D3E5M9_BRAOL; Uncharacterized protein
STRINGBo9g052080.10.0(Brassica oleracea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-171bZIP family protein