PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013613267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 374aa MW: 42331.9 Da PI: 9.7369 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22 | 3.4e-07 | 243 | 279 | 17 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 A+rsR RK+++i eLe+ v++L+ae ++ l+ l+ XP_013613267.1 243 AQRSRVRKLQYISELERTVQALQAEGSKVSADLDFLN 279 89***********************888777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0069 | 228 | 291 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.1E-5 | 228 | 302 | No hit | No description |
CDD | cd14703 | 2.41E-14 | 235 | 282 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-5 | 243 | 285 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence Send to blast |
MASSKGTQSV KDLMHPGKNA LLPPKIPFPT VSAPYSEYIP LGSRHHGHKL NDEKPHHHHH 60 HQRTSSESDL VEEPPFWLDD LLNEPESPVR KCGHRRSSSD SYAYLDMANA KNISLTLQND 120 FSYRNTGSST QRGGVHELDW NHNAQGAAFY SDSNFLKQTN RQRDSLVVAS GPRPSWQPFT 180 RESVGGKHMG SSSYMPQEAP ETKNYAKTLS HDAKKFSPEQ KNSNAQPVTI DADNTRRAKQ 240 QFAQRSRVRK LQYISELERT VQALQAEGSK VSADLDFLNQ RNLILSMENK ALKQRLESIA 300 QEKLIKQMEQ ELLEKEIGRL RALYQQQQQT QQPPASHKRA SSKDLDSQFS SLSLNSKDSN 360 SSRDSVSVTS QFHF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013613267.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013613266.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Refseq | XP_013613267.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
TrEMBL | A0A0D3E5M9 | 0.0 | A0A0D3E5M9_BRAOL; Uncharacterized protein | ||||
STRING | Bo9g052080.1 | 0.0 | (Brassica oleracea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-171 | bZIP family protein |