PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013610847.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family G2-like
Protein Properties Length: 173aa    MW: 20286.5 Da    PI: 10.8567
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013610847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.17.4e-271568255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrW+++LH+ Fv +v++LGG+ kAtPk+i+++m+vk+Ltl+hvkS LQ+YR 
  XP_013610847.1 15 PRLRWATDLHQYFVYVVNRLGGERKATPKKIVQAMGVKSLTLSHVKSLLQMYRN 68
                    8****************************************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-251171IPR009057Homeodomain-like
SuperFamilySSF466894.3E-121371IPR009057Homeodomain-like
TIGRFAMsTIGR015579.9E-201570IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MEKPIVRFYT KSKMPRLRWA TDLHQYFVYV VNRLGGERKA TPKKIVQAMG VKSLTLSHVK  60
SLLQMYRNKK RRDSVQAERI MRQEMRWRQF QQHFQIYERL RDATEFIQNQ RRLSDNKEKT  120
IEFLKPSNKT MEVGHADDGL VAVSDGANVR LNSTGVLKGE EKLSLGLTLG LNY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013610847.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013610847.11e-127PREDICTED: putative Myb family transcription factor At1g14600
TrEMBLA0A3P6E6D01e-124A0A3P6E6D0_BRAOL; Uncharacterized protein
STRINGBo9g077970.11e-123(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04580.12e-42G2-like family protein