PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013606583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 416aa MW: 45966.9 Da PI: 9.8562 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.5 | 8.1e-15 | 338 | 389 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkke 55 +r++r++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+ + +e ++k+ XP_013606583.1 338 RRQKRMIKNRESAARSRARKQAYTLELEAEVAQLKEQNEELQRKqVEIMEKQ 389 69*************************************9975404434444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.4E-14 | 334 | 399 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.921 | 336 | 381 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-10 | 338 | 389 | No hit | No description |
Pfam | PF00170 | 1.0E-12 | 338 | 394 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.30E-25 | 338 | 392 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.9E-14 | 338 | 393 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 341 | 356 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MGSRFNFVDD AKQPALGTGV PLTRQNSVFS LTFDEFQNSW GGGVGKDFGS MNMDELLKNI 60 WTAEESHSMM ANNTSFNNTF NGGLSVGVGG ELGGVGGGLQ RQGSLTLPRT ISQKRVDDVW 120 KELMKDDDAG SGGGGASGVP QRQQTLGEMT LEEFLVRAGV VREEPQQQVE RVDHFNGGFF 180 GFGGDAGLSS ARNGFGPNLV RPDLLTNQTQ PLQMQQQQPQ KVHQPQQLIQ KQQDVAFPKQ 240 STIAFSNTVD LVNRSQPPTQ EVKPSVLGVR DMPMNNNNLL QAVDFKTGVT VAAVSPGSQM 300 SPDLTPKSNM DASLSPVPYM FAGRVRKTGA VLEKVIERRQ KRMIKNRESA ARSRARKQAY 360 TLELEAEVAQ LKEQNEELQR KQVEIMEKQK KQLLEPMRQT WGCKRQCLRR TLTGPW |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots and flowers. {ECO:0000269|PubMed:11884679}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013606583.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC206509 | 0.0 | KC206509.1 Brassica napus clone BAC CZ7N2, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013606568.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_013606577.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_013606583.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0D3A244 | 0.0 | A0A0D3A244_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6FK90 | 0.0 | A0A3P6FK90_BRAOL; Uncharacterized protein | ||||
STRING | Bo1g007700.1 | 0.0 | (Brassica oleracea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 0.0 | abscisic acid responsive elements-binding factor 3 |