PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013601787.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 394aa    MW: 44210.5 Da    PI: 7.5011
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013601787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.58e-10266306545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k ++r+ +NRe Arrs +R  + i +Leekv++Le+e  +L
  XP_013601787.1 266 KYAKRMLSNREGARRSVKRTAQHILNLEEKVQTLEKEGVTL 306
                     779*********************************97776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-8262326IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-6264339No hitNo description
PROSITE profilePS502178.611264327IPR004827Basic-leucine zipper domain
PfamPF001704.8E-7266307IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-6267313No hitNo description
CDDcd147022.42E-7269316No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MDRQAENVPS QTSFVLSTQF PCPPSGQNRG SMPPPRRSSL PPLPPKRPTT TTTTRHQQIG  60
LQNFNPGPRL LPPQSPVFRS WTPMSSPAPS SSFQYLQSAP PVAYHNAALP PRPPTTSVSA  120
RGSAYSGNDS AVFPSMDAMK MIYPEPIEMP VGVNYSKEGH GEPAGFMDEQ VYMDLDEIFD  180
FSTKDDDVAR IGSGSSENNK RNAGVKKRAA PSRKTRRKSV SPSVDCNNLN NWKSSVAIEK  240
GMFTESQMNE IARSKTLQKY VVTDPKYAKR MLSNREGARR SVKRTAQHIL NLEEKVQTLE  300
KEGVTLTVHT SFAEKKKLGL EEENKQLRIR LQEIQDQSKR ANASEECNNE EINWVKQKGT  360
EEVFPDWDTT MDEFLLEQLN ELNEEPETNN CGFE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013601787.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1894800.0AC189480.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB082F21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013601787.10.0PREDICTED: probable transcription factor PosF21
TrEMBLA0A3P6GF710.0A0A3P6GF71_BRAOL; Uncharacterized protein
STRINGBra031173.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2154335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.35e-17bZIP family protein