PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013598435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 17740.9 Da PI: 6.1503 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 85 | 134 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +++kGVr+++ +g+W AeI+dp + +r +lg+f ta++Aa+a++ a kl XP_013598435.1 85 KKHKGVRQKP-SGKWSAEIWDP-----SlqRRRWLGTFPTAKMAAEAYDDAESKLV 134 589*****99.7*********9.....445********************998886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 3.1E-22 | 86 | 150 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-14 | 86 | 138 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.9E-20 | 86 | 138 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.61 | 86 | 147 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.1E-9 | 86 | 134 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.3E-6 | 87 | 98 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.37E-22 | 89 | 139 | No hit | No description |
PRINTS | PR00367 | 4.3E-6 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MDHSENIPSC DHKPPRLITR DQEHVIMVSA LLQVISNVRG DNSSSNSVAC EALHQPLDAG 60 PCPLCNITGC LGCAFPVHEE IEKEKKHKGV RQKPSGKWSA EIWDPSLQRR RWLGTFPTAK 120 MAAEAYDDAE SKLVKRKAAR SGTMNGDEPS IHREDDGEDE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013598435.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013598435.1 | 1e-117 | PREDICTED: putative ethylene-responsive transcription factor ERF121 | ||||
Swissprot | Q9FGC9 | 1e-61 | EF121_ARATH; Putative ethylene-responsive transcription factor ERF121 | ||||
TrEMBL | A0A0D3DGA8 | 1e-114 | A0A0D3DGA8_BRAOL; Serine/threonine-protein phosphatase | ||||
TrEMBL | A0A0D3DGB5 | 1e-115 | A0A0D3DGB5_BRAOL; Uncharacterized protein | ||||
STRING | Bo7g111070.1 | 1e-115 | (Brassica oleracea) | ||||
STRING | Bo7g111140.1 | 1e-115 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3472 | 15 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67010.1 | 7e-55 | ERF family protein |