PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013596951.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family ERF
Protein Properties Length: 151aa    MW: 16380.1 Da    PI: 6.7787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013596951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-161161155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+G+r++k +g+Wv+eIr+p +   r r +lg+f tae+Aa a++ a  +l++
  XP_013596951.1 11 SKYRGIRRRK-WGKWVSEIRVPGT---RDRLWLGSFSTAEGAAVAHDVAFYCLHQ 61
                    89*****998.**********943...5*********************999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-81159IPR001471AP2/ERF domain
CDDcd000187.14E-281173No hitNo description
SuperFamilySSF541711.63E-171172IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-251272IPR001471AP2/ERF domain
SMARTSM003804.4E-311277IPR001471AP2/ERF domain
PROSITE profilePS5103221.5881271IPR001471AP2/ERF domain
PRINTSPR003672.2E-91324IPR001471AP2/ERF domain
PRINTSPR003672.2E-93551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MDCRDSSESQ SKYRGIRRRK WGKWVSEIRV PGTRDRLWLG SFSTAEGAAV AHDVAFYCLH  60
QPNSLESLNF PHLLPPYIAS SNTSPRSIQQ AASNAGMAVD AGIVNGNGVT GNSGCGHTTA  120
YCGNGGEVME PLNISVYDYL DGHDHVWSSS F
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013596951.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1553407e-98AC155340.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH020D15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013596951.11e-110PREDICTED: ethylene-responsive transcription factor ERF019-like
RefseqXP_013705650.11e-110ethylene-responsive transcription factor ERF019
SwissprotO805426e-80ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A078FHQ91e-109A0A078FHQ9_BRANA; BnaC07g13470D protein
TrEMBLA0A0D3D7981e-109A0A0D3D798_BRAOL; Uncharacterized protein
TrEMBLA0A3P6F1271e-109A0A3P6F127_BRAOL; Uncharacterized protein
STRINGBo7g057680.11e-110(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38652860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-82ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]