 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_013596276.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
GRAS |
| Protein Properties |
Length: 433aa MW: 48323.2 Da PI: 4.971 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013596276.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 307 | 4.4e-94 | 31 | 419 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfsh 95
++lLl+cA+a++s+d++l+q++++ +++las+dgd++qRla+ +++AL +r a +++ ++ l +s+++e+ + ++ l +f++++P+++f++
XP_013596276.1 31 EQLLLHCANAIESNDATLTQQTIWVINNLASSDGDSTQRLASSLLRALISRAATKSPA-FSFLsVASASHETLHRFSVIELAAFVDLTPWHRFGF 124
79***************************************************95555.555514444444335555555555************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.. 181
++aN aIl+av+g + vHi+D+++++++Q p+L++++a++ ++pp l++T+v s+++ ++ee+g +L +fA++ +v +ef+++
XP_013596276.1 125 IAANAAILDAVKGYSSVHIVDLSLTHCMQIPTLIDSMATKLinkeQPPPLLKLTVVLSESPPpplLGISYEELGLKLVSFAATRNVAMEFRIIys 219
**************************************99887778899*********88878888999***********************955 PP
GRAS 182 .vakrledleleeLrvkp...gEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+++ l++l +e+Lr++p +Eal+Vn++++lh+++++++s +s r+ +Lk +++l+P++v+++e++ad +s++F +r+ + ++y++ +d+
XP_013596276.1 220 sYSDGLSSL-IEQLRLDPlvcNEALVVNCHMMLHYIPNDTLSYSSpSRSLFLKELRDLNPTMVTLIEEDADFTSSNFIARLRSLFNYMWIPYDTA 313
444556666.9********************************9988999********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve....eesgslvlg 361
++ l se+r+++E+ +g++i nvva+egaer+er e +++W er++ea F+ v ++e +a +++++l++++ ++g++ + ++ + +vl+
XP_013596276.1 314 DTFLTCGSEQRQWYEAD-IGWKIDNVVAKEGAERVERLEPKSRWFERMREADFTGVGFGEAVAREVQTMLEEHAaGWGMKRDvddsDDVERFVLT 407
*****************.********************************************************9999887755544578899** PP
GRAS 362 WkdrpLvsvSaW 373
Wk++++v++SaW
XP_013596276.1 408 WKGHSVVFASAW 419
************ PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 433 aa
Download sequence Send
to blast |
MNKAMILNPT RPVWPGFSSS KSLCGDANCM EQLLLHCANA IESNDATLTQ QTIWVINNLA 60
SSDGDSTQRL ASSLLRALIS RAATKSPAFS FLSVASASHE TLHRFSVIEL AAFVDLTPWH 120
RFGFIAANAA ILDAVKGYSS VHIVDLSLTH CMQIPTLIDS MATKLINKEQ PPPLLKLTVV 180
LSESPPPPLL GISYEELGLK LVSFAATRNV AMEFRIIYSS YSDGLSSLIE QLRLDPLVCN 240
EALVVNCHMM LHYIPNDTLS YSSPSRSLFL KELRDLNPTM VTLIEEDADF TSSNFIARLR 300
SLFNYMWIPY DTADTFLTCG SEQRQWYEAD IGWKIDNVVA KEGAERVERL EPKSRWFERM 360
READFTGVGF GEAVAREVQT MLEEHAAGWG MKRDVDDSDD VERFVLTWKG HSVVFASAWV 420
PMNRVDGCSH VEA
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
