PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013595131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17711.7 Da PI: 10.2786 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.1 | 1.7e-16 | 93 | 141 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 +++kGVr+++ +g+W AeI+dps + r +lg+f tae+Aa+a++ a+ kl XP_013595131.1 93 TKHKGVRQKP-SGKWSAEIWDPSLQ---GRRWLGTFPTAEMAAEAYDDAAGKL 141 69******99.7*********9653...688******************9776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.89E-21 | 93 | 147 | No hit | No description |
Pfam | PF00847 | 3.5E-9 | 93 | 141 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-22 | 94 | 157 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.993 | 94 | 155 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-20 | 94 | 146 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-14 | 94 | 146 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.7E-6 | 95 | 106 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-6 | 117 | 133 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MGIRWEALNL RPKEETGESR GGGRPEEKRQ RRTSFRHAPV TNLTQNHQTF SFDKRSRACD 60 HGFCSDTSDI QRQSIAGCYG CAFPRREEIK KETKHKGVRQ KPSGKWSAEI WDPSLQGRRW 120 LGTFPTAEMA AEAYDDAAGK LVKRKASRSG TANGEEA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013595131.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013595131.1 | 1e-114 | PREDICTED: ethylene-responsive transcription factor ERF120-like | ||||
Swissprot | Q9SK67 | 2e-33 | EF120_ARATH; Ethylene-responsive transcription factor ERF120 | ||||
TrEMBL | A0A0D3DGB1 | 7e-54 | A0A0D3DGB1_BRAOL; Uncharacterized protein | ||||
STRING | Bo7g111100.1 | 1e-54 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3472 | 15 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20350.1 | 2e-32 | ERF family protein |