PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013594760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | ERF | ||||||||
Protein Properties | Length: 155aa MW: 17387.6 Da PI: 8.303 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.5 | 6.6e-13 | 101 | 149 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 +++kGVr ++ +g+W AeI+dps+ ++r +lg+f t ++A + +++a+ +l XP_013594760.1 101 KKHKGVRKKP-SGKWSAEIWDPSI---KARRWLGTFPTYDMAVQSYEEAKYEL 149 589****999.7*********965...69********************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.10E-18 | 101 | 145 | No hit | No description |
PROSITE profile | PS51032 | 17.029 | 102 | 155 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.6E-9 | 102 | 155 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.03E-11 | 102 | 149 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-15 | 102 | 151 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MNNDQFDPTR MNNSGNVQSY VQNENFTPVS QPSYLTRDQE HEIIVSTLRQ VISSPGGDTS 60 SSYWIASEVL PPPDAGPCPI CGVTGCYGCA FPRPVEIKKE KKHKGVRKKP SGKWSAEIWD 120 PSIKARRWLG TFPTYDMAVQ SYEEAKYELA VRRSA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013594760.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013594760.1 | 1e-114 | PREDICTED: putative ethylene-responsive transcription factor ERF121 | ||||
Refseq | XP_013689676.1 | 1e-114 | putative ethylene-responsive transcription factor ERF121 | ||||
Swissprot | Q9FGC9 | 1e-67 | EF121_ARATH; Putative ethylene-responsive transcription factor ERF121 | ||||
TrEMBL | A0A078JY29 | 1e-112 | A0A078JY29_BRANA; BnaC07g48550D protein | ||||
TrEMBL | A0A0D3D898 | 1e-112 | A0A0D3D898_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6EQN5 | 1e-112 | A0A3P6EQN5_BRAOL; Uncharacterized protein | ||||
STRING | Bo7g064150.1 | 1e-113 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3472 | 15 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67010.1 | 5e-60 | ERF family protein |