PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013593769.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family BES1
Protein Properties Length: 285aa    MW: 30685.2 Da    PI: 9.5924
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013593769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.11.4e-65151531146
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g++gr+ptwkErEnnk+RERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+v++DGttyrkgs+p+       +  ++s +ss+q
  XP_013593769.1  15 GATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCVEAGWIVHEDGTTYRKGSRPT-----ETTPPRVSACSSIQ 104
                     589*************************************************************************.....678899******** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslv 146
                     +s++ssa++spv+sy+asp+sss+psp+++d ++++  + l+p+l++l+++
  XP_013593769.1 105 LSPHSSAFQSPVPSYQASPASSSYPSPTRFDPNHSS--TYLIPYLQNLASS 153
                     *********************************887..99*****999764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.6E-6017150IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005773Cellular Componentvacuole
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MTASGGGSAA AGGAGATGRM PTWKERENNK KRERRRRAIA AKIFTGLRSQ GNYKLPKHCD  60
NNEVLKALCV EAGWIVHEDG TTYRKGSRPT ETTPPRVSAC SSIQLSPHSS AFQSPVPSYQ  120
ASPASSSYPS PTRFDPNHSS TYLIPYLQNL ASSGNLAPLR ISNSAPVTPP VSSPRGSHPR  180
LPKPQFSNFP VSAPSSPTRR LHHYYTSIPE CDESDVSTVD SCRWTRFQPV TVSQTCPPSP  240
TFNLVKNSVC VGGGDVSVKP WEGEKIHDVG VDDLELTLGN ANGRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-2519102372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-2519102372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-2519102372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-2519102372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013593769.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1891890.0AC189189.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002E24, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013593769.10.0PREDICTED: BES1/BZR1 homolog protein 1
SwissprotQ9S7F31e-143BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLA0A0D3DDU60.0A0A0D3DDU6_BRAOL; Uncharacterized protein
STRINGBo7g099470.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144671721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.11e-134BES1/BZR1 homolog 1