PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013589599.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family G2-like
Protein Properties Length: 592aa    MW: 66640.6 Da    PI: 4.8138
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013589599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.38e-14205254454
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                      +Wt + H +F+ a++ L G+++  Pk+ile+mk   L+  +v S LQkY+
  XP_013589599.1 205 NVWTRDRHMKFLAAISIL-GEKESRPKSILEIMKDSNLSQRQVGSYLQKYK 254
                     58****************.999****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011016.90819131IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.4E-520127IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521728.45E-920166IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.1E-820151No hitNo description
SuperFamilySSF466895.38E-9205256IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-12205254IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.8E-14205257IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MAENMVNLTE NIIPESTGVI LLIDHDAISV ASLIPMLKQR SHKDVMSVNG ASEAISVIEK  60
QKDIGLVIAN VELSDTNDFL TAMHHKEIHL ILIGTEIHIK ETSDLLTKRA CSCLKKPISE  120
NDIDNMLQLV LPNKRQEWEK INVAEKRENI VEERMKQMKA FRDHIKRQGT SQSSLLGRRP  180
LNKTFTSSQM YQKGKSIADV EGCKNVWTRD RHMKFLAAIS ILGEKESRPK SILEIMKDSN  240
LSQRQVGSYL QKYKFQVEII NKTLTRNEWK STDKTYEYPS DYVYPFKASN LAKTLIESNS  300
MWCSLRKTKS SSLSTVQYSF KRSAAEKDRM PKFHIGEKSG LHRHSLSGSR VGASNLDAFQ  360
KESAKICISQ SNPNPSQPSS YVLETNKNPL DMNQMGRVSF GENHGLSQDM IFNGTKSNHL  420
GLVSGETSHI ETPLETDTNQ MDWDWFSSDE AYAILEDLTV PETNINQVGL VPGETSFAAL  480
DNVAPPENNT NEIGLVPNQE GNDDIPIEDL ISFDTDIINE MDDLDAWLEN YNSFQGDVPL  540
PASCNDHDLA FTPTTSQHQN IEAANPREAT EEGNHLDDDS DENLDWIDDI FA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013589599.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1894890.0AC189489.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084K02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013589599.10.0PREDICTED: putative two-component response regulator-like APRR6
RefseqXP_013699703.10.0putative two-component response regulator-like APRR6
RefseqXP_022569471.10.0putative two-component response regulator-like APRR6
TrEMBLA0A0D3CYW20.0A0A0D3CYW2_BRAOL; Uncharacterized protein
TrEMBLA0A3N6QL740.0A0A3N6QL74_BRACR; Uncharacterized protein
STRINGBo6g106630.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM136851424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.11e-110pseudo-response regulator 6