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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSBRNA2T00154170001 |
| Common Name | GSBRNA2T00154170001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
EIL |
| Protein Properties |
Length: 500aa MW: 56783.8 Da PI: 7.3119 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSBRNA2T00154170001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 347.7 | 2.5e-106 | 45 | 405 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90
eel+k+ wkd+++lk+lke++k+ l++++ k+ e++r++ m +aQDgiLkYM k+me c+a+GfvYg + e+g++v+g+sd+
GSBRNA2T00154170001 45 EELEKKIWKDKQRLKKLKEMSKNGLGRASL-----KQPPDDEHSRKRMMYQAQDGILKYMSKTMERCKAKGFVYGVVFENGRTVTGSSDN 129
8**********************9866655.....678999************************************************* PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS
EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgessl..qte..rsseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176
Lr+WW+++v+fdrngpaai k+q + +++s + + ++e + + h+l elqDTtlg+LLsalm c+ppqrr+plekgv+pPWWPtG
GSBRNA2T00154170001 130 LRGWWRDQVRFDRNGPAAILKHQREINLSSTDGNElgSSEdgGDCTAHKLLELQDTTLGALLSALMPNCKPPQRRYPLEKGVPPPWWPTG 219
**********************8887777654433243331156789******************************************* PP
--HHHHHHT--TT--...-----GGG--HHHHHHHHHHHHHHT.GGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
EIN3 177 kelwwgelglskdqg..tppykkphdlkkawkvsvLtavikhm.sptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
ke+wwg l l+ + +p y+kph lkk+wkv++L vi+hm + +i+ i +l+ +s+ lq+km+++e +l+ ln+e++++ + + +
GSBRNA2T00154170001 220 KEDWWGDLPLPDGCRghPPAYRKPHGLKKMWKVGILIGVIRHMmASDITDIVKLVGRSRTLQEKMTSREGSLWLAALNREKAIAVQSQKQ 309
**************999*************************85799*********************************9988777777 PP
XX..XXXX.....XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXX CS
EIN3 264 ss..slrk.....qspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadk 346
+ s + ++ + + + ++++veg ++ + q+ + ++ ++++ +k++ + ++ tc++s +++s +e++f+d+
GSBRNA2T00154170001 310 PLtfS--EedgtgGEMDALFPEPADYEVEGSVGPRHRLNQQFHGFDNNNFNSGYSNKRRFEGESLHPGTNLTCENSPCPYSRPEMGFNDR 397
43341..22344588889999999*****888888777788887776666665555555555666667789******************* PP
XXXXXXXX CS
EIN3 347 nsisqney 354
++++++
GSBRNA2T00154170001 398 VLRENHQM 405
******96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MYNTNIGMFP TLVTSPVPRF PEGETCFASP NATCNDPTEE EMEIEELEKK IWKDKQRLKK 60
LKEMSKNGLG RASLKQPPDD EHSRKRMMYQ AQDGILKYMS KTMERCKAKG FVYGVVFENG 120
RTVTGSSDNL RGWWRDQVRF DRNGPAAILK HQREINLSST DGNELGSSED GGDCTAHKLL 180
ELQDTTLGAL LSALMPNCKP PQRRYPLEKG VPPPWWPTGK EDWWGDLPLP DGCRGHPPAY 240
RKPHGLKKMW KVGILIGVIR HMMASDITDI VKLVGRSRTL QEKMTSREGS LWLAALNREK 300
AIAVQSQKQP LTFSEEDGTG GEMDALFPEP ADYEVEGSVG PRHRLNQQFH GFDNNNFNSG 360
YSNKRRFEGE SLHPGTNLTC ENSPCPYSRP EMGFNDRVLR ENHQMTCPYK QPTPFYQPAE 420
PFGMPYPDYN RSFYGNRPES QSIPDYFTQS NNLYRPKAAE RGGNTSVMNH NTNNGYAQTV 480
GMENYHQNQD QDLSMPWIQ*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC189583 | 0.0 | AC189583.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH012D09, complete sequence. |
