PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g27100.3.p
Common NameBRADI_4g27100, LOC100845620
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 395aa    MW: 42999.8 Da    PI: 9.8689
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g27100.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.9e-11102130533
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                       k  rr+++NReAAr+sR+RKka+i++Le+
  Bradi4g27100.3.p 102 KTLRRLAQNREAARKSRLRKKAYIQQLET 130
                       7789***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-698160IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-799143No hitNo description
PROSITE profilePS502178.749100143IPR004827Basic-leucine zipper domain
PfamPF001701.9E-8102130IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-7103143No hitNo description
PROSITE patternPS000360105120IPR004827Basic-leucine zipper domain
PfamPF141444.4E-27192265IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MHAAEQLAAA KINGGAAMAA MMLPNGGNPQ QPSPRRPEQH QQGAAGGLNA SPASLLPNSA  60
KENKNSSTNL IKKEGTSSGK GATSSSTDQE REAGVRRTQD PKTLRRLAQN REAARKSRLR  120
KKAYIQQLET SRIRLSQIEQ QVQAARVQGV LLGTTGDQHH QLQGLPNSAP SVAGMFDAEY  180
GRWVEEHGKL IFQLRAALNE HVPDCNQLQA LVGAAMAQHD ELLNLKAAIA RADIFHLLCG  240
VWASPAERCF LWLGGFRPSD VIKVMLKHVE PLSEAQLLGI YNLQQGVQET EEALNQGMES  300
LQHSLSDTVA APEVSAGNFM GHMSLALNKI ASMEAIVRQA DSLRQQTLQK LHQTLTIRQA  360
ARCLVAIADY FHRLRAISTL WAARPRHDQQ GPHP*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g27100.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576380.10.0transcription factor TGAL7
SwissprotQ6H4341e-175TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A2K2CQI10.0A0A2K2CQI1_BRADI; Uncharacterized protein
TrEMBLI1IP150.0I1IP15_BRADI; Uncharacterized protein
STRINGBRADI4G27100.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.21e-110bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]