PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bradi3g45170.4.p

Common Name

BRADI_3g45170, LOC100824515

Organism

Brachypodium distachyon

Taxonomic ID

15368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Family

bZIP

Protein Properties

Length: 309aa MW: 33722.7 Da PI: 6.1454

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bradi3g45170.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	6.1e-08	187	234	14	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 R + +rsR RK+++i+ Le+ v++L+ N aL e+++l+ ++a+l++ Bradi3g45170.4.p 187 RRSGQRSRVRKLQYIADLERTVDSLQLRN-ALSMENKQLRIQIASLQQA 234 67889**********************.7************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	3.27E-14	186	235	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.2E-7	187	233	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MSRSPHLPPR CPQLGPQITR RDDSLFTQSC RFPSDDPFFG EPPCWLDDLL ADSGKTPNLP 60 PLRRACSDSD AILDALTIFK LPIFPSEEGD VQPASESGDS FDAVAGGESG SAVEGSCVYG 120 PNSPRQKSRL TSSESSMVNA VLENVPNNPL QYLTIDPSST LHGNVANGTG DAYDDVNHLD 180 QDKSFKRRSG QRSRVRKLQY IADLERTVDS LQLRNALSME NKQLRIQIAS LQQAKLVKDG 240 QTLFLKKETE RLKQISAGHR RSRSVTSCFD TDSFGADPSA INWQMLDMSK LSLNGSPVPV 300 PPRGGYGL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	RRSGQRS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Bradi3g45170.4.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003575087.1	0.0	basic leucine zipper 34
Refseq	XP_024317941.1	0.0	basic leucine zipper 34
TrEMBL	A0A2K2D3B6	0.0	A0A2K2D3B6_BRADI; Uncharacterized protein
STRING	BRADI3G45170.1	0.0	(Brachypodium distachyon)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	7e-14	bZIP family protein

Link Out ? help Back to Top
Phytozome	Bradi3g45170.4.p
Entrez Gene	100824515