PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g33820.2.p
Common NameBRADI_3g33820, LOC100829512
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family STAT
Protein Properties Length: 707aa    MW: 78023.3 Da    PI: 5.6352
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g33820.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT190.42e-592313491118
              STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipkl 92 
                       l+vvl+na+g+p++kd+++vasL+yad+g+vveks ddaeapLLis++G+e++++++pl++lrGra+fklkisqLsskcdn+Lfri+f+++++
  Bradi3g33820.2.p 231 LEVVLTNAFGEPANKDIQIVASLVYADTGVVVEKSrDDAEAPLLISCEGLEYPATSKPLPILRGRALFKLKISQLSSKCDNKLFRIYFSTLHV 323
                       79*********************************9********************************************************* PP

              STAT  93 kkypfleavskpirCisrsrntrsss 118
                       +kypflea s+pirCisr r  r+++
  Bradi3g33820.2.p 324 QKYPFLEASSRPIRCISRGRPIRPLG 349
                       *********************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.103.2E-4602674IPR000980SH2 domain
SuperFamilySSF555502.35E-8604686IPR000980SH2 domain
PROSITE profilePS5000110.582608706IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    Send to blast
MAAPAESGGI EDYRSLRDAR VDLDLEAARG SGEGGRARGF AVCFWLYLSG PARPSSVLLH  60
QMTAGADNKL PFLVLSEQNK LLLFPLLRLH REAPSLSSFY PWTDTTNLSS VNECPLEKWI  120
HIGCEVTENV MRLHIDGSLV AEACLCSLSR EPDNQDDAHQ ICLVGSNNMV ESYLNNIQVL  180
SVLGTIHEQY TKNPPSKLSI DFSCYDGIEV GDDGVWCIVG GKPSCRRNVI LEVVLTNAFG  240
EPANKDIQIV ASLVYADTGV VVEKSRDDAE APLLISCEGL EYPATSKPLP ILRGRALFKL  300
KISQLSSKCD NKLFRIYFST LHVQKYPFLE ASSRPIRCIS RGRPIRPLGP GKGTNSSTMD  360
EIHLVNNAQG FGRVGKVIGC SQSRDQSSVV HLHPSKFLKV EDDGTETHKT VSQQTRKMVV  420
EAQSVTRTDP AASDSDSMDA RSSWSGSDRD EVETFSDAII FRYCLEGTSQ RSTFLRGAAA  480
SINVDDLITL ANQVSLYSGC SHHRNQIIIS KQLLEEAADT WSIISKNNER ALWSSAVPEI  540
MAKFMVIAHS TNRGLSEQDQ EVLRVIAGCG DDLGRDEFDR LWNWLYPVAV SLSKDKINNL  600
WCCTEPVWIE GLITKEEAEN ALRSSSELLK NPGTFVLRFP TTRSWPHPDA GSLVVTYVGF  660
DNSIHHRLLS LDASDSRAGS LQDLLLQEPE LLQLGRVDRL PTAMRN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g33820.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010235010.10.0SH2 domain-containing protein A isoform X1
TrEMBLA0A0Q3HWN40.0A0A0Q3HWN4_BRADI; Uncharacterized protein
STRINGBRADI3G33820.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Representative plantOGRP59411618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-146SH2 domain protein B