PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g15590.1.p
Common NameBRADI_3g15590
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 457aa    MW: 50500.9 Da    PI: 7.189
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g15590.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-10134166335
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekv 35 
                       +++++rr+++NReAAr+sR+RKka+i++Le+  
  Bradi3g15590.1.p 134 KIRKTRRLAQNREAARKSRLRKKAYIQNLETSR 166
                       5799*************************9855 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.4E-7131176No hitNo description
SMARTSM003380.0031132190IPR004827Basic-leucine zipper domain
PfamPF001707.3E-8134169IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002134176IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.3E-7135176No hitNo description
PROSITE patternPS000360139154IPR004827Basic-leucine zipper domain
PfamPF141441.6E-26229304IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MELYPGYLED RFSFHKHRGG GGGGGAPGGG RYMPTVAESS SSMGAIYERR HQHHPLHGAW  60
AGYMPSPLSG PPGVHEAAAA AVRAMDLTDP KFEPPSQPLE QQEQEEEEDH HALALPLPES  120
PDSSDHDPAR PRDKIRKTRR LAQNREAARK SRLRKKAYIQ NLETSRMKLA RMEQELAMAR  180
QQHVLCFGRA GTSTSSPVGR LPLPPSFNPG VAAFEIEYAR WVEEQGRQTA ELRAALQLLQ  240
PDPTRLRLLA EAALAHYDRL FEAKSAAARR DVFFVMSGAW RSPAERFFLW ISGFRPSDLL  300
AVLSPHLQTE LHDADHSPAL APALTEAQAE EVARLRRTSR QAEDALFHGL VTLRQALAES  360
LLAPAMAATA ETQQEVSFDS GYGGGDGGEM GGAMGRLEEL AGFVEQADHL RQQTLRNMYR  420
ILTPTQAARG LLALGEYFHR LRSLSELWVK RPREPA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11730RGGGGGGGAPGGGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g15590.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7308997e-82EU730899.1 Brachypodium distachyon clone BAC DH002G02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024317982.10.0transcription factor HBP-1b(c38) isoform X1
TrEMBLA0A0Q3HP320.0A0A0Q3HP32_BRADI; Uncharacterized protein
STRINGBRADI3G15590.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5014522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.63e-92bZIP family protein