PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g04370.1.p
Common NameBRADI_3g04370
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family ERF
Protein Properties Length: 92aa    MW: 9774.04 Da    PI: 11.5181
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g04370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.22e-085488343
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43
                      ++GV++ + +gr++A+I++        + +lg+f+ta +A+
  Bradi3g04370.1.p 54 FRGVSRQR-SGRYRAQIKHL-----GVTLYLGTFDTAHGAK 88
                      8****776.8*********3.....4**********99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.1E-65387IPR001471AP2/ERF domain
PROSITE profilePS510329.9015391IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-65487IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MVVTGTAAES VQHRAVDAAA ATAAEHEELA AHAAAGGTRK KRKIKARPEA RTEFRGVSRQ  60
RSGRYRAQIK HLGVTLYLGT FDTAHGAKGR H*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g04370.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236663.11e-15ethylene-responsive transcription factor 9
TrEMBLI1HXD92e-56I1HXD9_BRADI; Uncharacterized protein
STRINGBRADI3G04370.14e-57(Brachypodium distachyon)