PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g40582.1.p | ||||||||
Common Name | LOC100844261 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 127aa MW: 13642.3 Da PI: 9.2596 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 8e-12 | 27 | 85 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+ +++ Le v+++ a N a++ ++e + ++a++++e+ Bradi2g40582.1.p 27 RKRKRKESNRLSAQRSRARKQRQVDDLEAQVAAMRARNCAMAAAANEAERLCAAVQAEN 85 6789*************************************************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-9 | 23 | 87 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-7 | 24 | 78 | No hit | No description |
PROSITE profile | PS50217 | 9.806 | 25 | 88 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.8E-9 | 26 | 84 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.91E-9 | 27 | 79 | No hit | No description |
CDD | cd14702 | 6.90E-9 | 28 | 60 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 30 | 45 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MASPGITTSS AGSVGAATPA VALTEERKRK RKESNRLSAQ RSRARKQRQV DDLEAQVAAM 60 RARNCAMAAA ANEAERLCAA VQAENALLSA RALELSARLE SLTDLIQCMD AVMYSNNNTN 120 NNSYYY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 26 | 31 | RKRKRK |
2 | 26 | 32 | RKRKRKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g40582.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024315686.1 | 2e-84 | bZIP transcription factor 11-like | ||||
TrEMBL | I1HNE2 | 4e-83 | I1HNE2_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G40580.1 | 6e-84 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 | Representative plant | OGRP16008 | 3 | 3 |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g40582.1.p |
Entrez Gene | 100844261 |