PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g30695.1.p
Common NameBRADI_2g30695, LOC100836752
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family WRKY
Protein Properties Length: 278aa    MW: 30110.4 Da    PI: 6.3891
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g30695.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.69.2e-22107171159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS...STTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae...dpkvveitYegeHnhe 59 
                       ldDg +WrKYGqK +++s++pr+Y+rCt++   +C ++++v+r+++   d++++ +tY g H+++
  Bradi2g30695.1.p 107 LDDGQAWRKYGQKYIHNSKHPRAYFRCTHKydqQCAAQRQVQRCEDdddDKDTFRVTYIGVHTCR 171
                       58***************************99999*********8752226789*********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-2393173IPR003657WRKY domain
SuperFamilySSF1182901.7E-22101173IPR003657WRKY domain
PROSITE profilePS5081117.546102173IPR003657WRKY domain
SMARTSM007744.7E-30107172IPR003657WRKY domain
PfamPF031066.9E-21108171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MAWPPPLMQV MDDLIKGQEF ATQLQGLLRD NPKVGLLMDQ ILQRFSRAID AAKAGAGEWS  60
SDVQSEVTYG GSGGGKRKSG AGGDSSRGAC RRRTQQSSVV TKTMNTLDDG QAWRKYGQKY  120
IHNSKHPRAY FRCTHKYDQQ CAAQRQVQRC EDDDDDKDTF RVTYIGVHTC RDPAAAPVHV  180
TRTAGCHLIS FGPTPTTTTS TTTTAQVGSG LQSLKRESGG DQEEVLSSST PAATPPAPAW  240
PDLGDVTSAP HCCYAGVDFL EDYTQGLEYI LPFDLDG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-3197171169OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g30695.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231532.10.0probable WRKY transcription factor 70
TrEMBLI1HKK00.0I1HKK0_BRADI; Uncharacterized protein
STRINGBRADI2G30695.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-17WRKY DNA-binding protein 70