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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi1g60140.1.p |
| Common Name | BRADI_1g60140 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
| Family |
GRAS |
| Protein Properties |
Length: 527aa MW: 55238.5 Da PI: 6.793 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi1g60140.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 173 | 2.2e-53 | 144 | 521 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselas.pdgdpmqRlaayfteALaarlar.svselykalppsetsekn....sseelaalkl..... 83
++lL cA av++++l+++q+l l elas ++gd+++Rlaay ++AL+ rl ++ ++a+++ + + +a ++
Bradi1g60140.1.p 144 EQLLSPCAVAVEARNLSRVQHLFYVLGELASfSSGDANHRLAAYGLRALSLRLPAaVGPAAAAAVRVPALGAECpssfA---AAEPRVfrasl 233
68999************************772567******************99667777777766666544443332...22222233366 PP
GRAS 84 ..fsevsPilkfshltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg......skeeleetger 164
f+evsP++ + + +aN aI + + ++ + + +D ++s+G+QWp+Ll++L+ p + pps+R+T+v++++++ + +
Bradi1g60140.1.p 234 irFHEVSPWFALPNALANAAIAQQLLQApgRPLSLVDVGVSHGVQWPTLLESLTRLPagRAPPSVRLTVVSAAAATraapfsASPPGYDFAPH 326
89***********************99998899*********************999767799*********9888899998888899999** PP
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlv.lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFl 254
L ++A+++++++++ dl+ + + ++Eal+V + ++l ++ ++er+evL+ v++l+P++vv++e ++ +s+ +
Bradi1g60140.1.p 327 LLRYAKSINLDLHIAR-----AGDLS-AQ--LGEEEALVVVCLqFRLGHVA------PEERTEVLRKVRDLKPDLVVLSELDVVVggGSAGAA 405
***********99986.....56663.33..46788887776615555554......556899*******************7765588899* PP
GRAS 255 erflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
+f+ le + +++s++a + + e+r+ +E+e g ++++ + e e Wr+r+++aGF++++++ +a+++a++llrk++
Bradi1g60140.1.p 406 GEFSARLELLWRFLESTSAAFKGRDgEDRRLMEAE-AGAP-AGMITAPASG-----EGREAWRDRMRAAGFQEAAFGGEAVESARSLLRKYDs 491
*****************66665555499******9.4444.5566665555.....68889*******************************5 PP
GRAS 346 sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
++++ + +++v l Wk++p+ ++S Wr
Bradi1g60140.1.p 492 GWEMAGAASGAAAVaLRWKGQPVSFCSLWR 521
555555566666667**************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042446 | Biological Process | hormone biosynthetic process |
| GO:2000032 | Biological Process | regulation of secondary shoot formation |
| Sequence ? help Back to Top |
| Protein Sequence Length: 527 aa
Download sequence Send
to blast |
MKAMDYHEPD EQELTTAVTA IADGGGLDWL EDSISLLSAD GDLSGSYGWW CDPPLLPAQQ 60
DDIGIVVAQT LPPPAALTTT GSPPTSIASP APASSKKRKS SPASGHSGGG SQRRRAEQER 120
ERPAGGGGKK KGGGSDCREA RWAEQLLSPC AVAVEARNLS RVQHLFYVLG ELASFSSGDA 180
NHRLAAYGLR ALSLRLPAAV GPAAAAAVRV PALGAECPSS FAAAEPRVFR ASLIRFHEVS 240
PWFALPNALA NAAIAQQLLQ APGRPLSLVD VGVSHGVQWP TLLESLTRLP AGRAPPSVRL 300
TVVSAAAATR AAPFSASPPG YDFAPHLLRY AKSINLDLHI ARAGDLSAQL GEEEALVVVC 360
LQFRLGHVAP EERTEVLRKV RDLKPDLVVL SELDVVVGGG SAGAAGEFSA RLELLWRFLE 420
STSAAFKGRD GEDRRLMEAE AGAPAGMITA PASGEGREAW RDRMRAAGFQ EAAFGGEAVE 480
SARSLLRKYD SGWEMAGAAS GAAAVALRWK GQPVSFCSLW RPAPPP*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 126 | 133 | GGKKKGGG |
