PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g53756.1.p
Common NameBRADI_1g53756
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family ERF
Protein Properties Length: 290aa    MW: 30672.2 Da    PI: 10.2925
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g53756.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1680129153
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                       ++y+GVr+++  g+WvAeIrdps    +   r +lg+f tae+Aa+a+ +ar+++
  Bradi1g53756.1.p  80 CQYRGVRRRS-YGSWVAEIRDPS----SlpGRRWLGTFTTAEQAAAAYNQARQEI 129
                       68*****888.8*********96....255688*******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.8E-880130IPR001471AP2/ERF domain
CDDcd000187.30E-1580125No hitNo description
Gene3DG3DSA:3.30.730.101.8E-1981129IPR001471AP2/ERF domain
SMARTSM003806.1E-1381146IPR001471AP2/ERF domain
PROSITE profilePS5103218.29481140IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-1381129IPR016177DNA-binding domain
PRINTSPR003672.1E-78293IPR001471AP2/ERF domain
PRINTSPR003672.1E-7105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MDDGDLQVVA AGGKGKNKQV AADQGQGEGE RDADATDSSS DEAEREACRA RQESLPAKLL  60
GVAKQVLSPA AEKKRKHKSC QYRGVRRRSY GSWVAEIRDP SSLPGRRWLG TFTTAEQAAA  120
AYNQARQEID AFKASRLIIP KPLPDLAPAP PQPALIPVVA PPTPQPVPAL LLLPPPGLAP  180
PPVAINFVRQ VPAVVPAGPE KLVQRRLGKG KKKKRSEQGE ASTSAVLLAP LPVPAPAPTR  240
PEKLVPRRRY GPPMKLHEQL ADCGGDGVPA LTTRIGAVDE GGCVVTSWV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g53756.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0Q3JRG70.0A0A0Q3JRG7_BRADI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3715823
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.15e-09ethylene responsive element binding factor 5