PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi1g43900.2.p | ||||||||
Common Name | BRADI_1g43900, LOC100838650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 436aa MW: 47637.9 Da PI: 8.3277 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.4 | 8.6e-10 | 147 | 188 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k err+++NReAAr+sR RKka++++Le +L + ++L Bradi1g43900.2.p 147 QKIERRLAQNREAARKSRIRKKAYVQQLESSRSKLAQLEQEL 188 588**************************8766666555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-7 | 141 | 190 | No hit | No description |
SMART | SM00338 | 2.5E-7 | 144 | 240 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.53 | 146 | 190 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.17E-22 | 148 | 200 | No hit | No description |
Pfam | PF00170 | 8.7E-7 | 148 | 188 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-7 | 148 | 191 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.9E-29 | 230 | 306 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence Send to blast |
MHQPRPFHVF RAERGGTTAG YHIGDGAALP TPSELYPRTS PNPSSKSSSN LTVANFAPLA 60 NADGVVASLG MTAPGALTEV DRFCLPRASA QFENWGDSGI VVTSPLTETS TDLDDSADKR 120 LVSMGGGGGA QRWVGGCVDT SERKGDQKIE RRLAQNREAA RKSRIRKKAY VQQLESSRSK 180 LAQLEQELQR ARQQGIFVGS GGSSDHGCST GGALAFDLQY ARWLDGYQYH VNDLRVGVHA 240 NISDDELRIL VEAVMLHYDH LFRLKSIATK SDVFHVMSGM WMSPAERFFM WLGGFRSSEL 300 LKVLASQLEP LTDQQLMGIC NLQQSSLQAE DALSQGMEAL QQALAETLAF AAAVVPSTGS 360 GDNVTNYMSQ MAIAMAKLST LENFLRQGDL LRQQTLQQMH RILTTRQAAR ALLVISDYFS 420 RLRALSSLWL ARPRA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi1g43900.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010229877.2 | 0.0 | transcription factor TGAL3 | ||||
Swissprot | Q5Z6N9 | 0.0 | TGAL3_ORYSJ; Transcription factor TGAL3 | ||||
TrEMBL | A0A0Q3L623 | 0.0 | A0A0Q3L623_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G43900.1 | 0.0 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 | Representative plant | OGRP722 | 16 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-105 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Bradi1g43900.2.p |
Entrez Gene | 100838650 |
Publications ? help Back to Top | |||
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