PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi1g43661.1.p | ||||||||
Common Name | BRADI_1g43661, LOC100833756 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 207aa MW: 23110.7 Da PI: 6.6352 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.5 | 4.3e-11 | 92 | 148 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 e +r rr ++NRe+ArrsR RK++++ +L+ +++L N++L ++l++ +a++ Bradi1g43661.1.p 92 EERRKRRVASNRESARRSRVRKQKQLGQLRAQAAQLRDANRELLDRLNRAIRDCARV 148 56899*****************************************99988888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-6 | 90 | 146 | No hit | No description |
SMART | SM00338 | 9.8E-7 | 90 | 154 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.002 | 92 | 155 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.6E-8 | 92 | 143 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-8 | 94 | 143 | No hit | No description |
CDD | cd14702 | 2.88E-12 | 95 | 146 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 97 | 112 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MNSGEVASVL LPPVVHFPPP DASTVSFEPH RYQYHQIAAA HDHFLFQYCH GFVDDEPFPL 60 DNPPPPAPAI RNNGSTTSSD EPAAGAERQR AEERRKRRVA SNRESARRSR VRKQKQLGQL 120 RAQAAQLRDA NRELLDRLNR AIRDCARVVR DNSRLREERA ELHRRLRELV VPVPVVDGDA 180 GVEVESSVAG IDEDDDESIM VAIATT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 114 | RRKRRVASNRESARRSRVRKQK |
2 | 106 | 112 | RRSRVRK |
3 | 106 | 113 | RRSRVRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi1g43661.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU730897 | 0.0 | EU730897.1 Brachypodium distachyon clone BAC DB038O09, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010229875.2 | 1e-147 | basic leucine zipper 43 | ||||
TrEMBL | A0A0Q3H6P3 | 1e-146 | A0A0Q3H6P3_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G43660.1 | 1e-130 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 | Representative plant | OGRP3104 | 11 | 29 |
Link Out ? help Back to Top | |
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Phytozome | Bradi1g43661.1.p |
Entrez Gene | 100833756 |