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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bradi1g34507.1.p |
| Common Name | BRADI_1g34507, LOC100824474 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
C3H |
| Protein Properties |
Length: 403aa MW: 43637.1 Da PI: 9.0911 |
| Description |
C3H family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi1g34507.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-CCCH | 34.7 | 2.9e-11 | 5 | 26 | 3 | 25 |
S---SGGGGTS--TTTTT-SS-S CS
zf-CCCH 3 telCrffartGtCkyGdrCkFaH 25
+elCr+f+r G CkyG++C+F H
Bradi1g34507.1.p 5 QELCRNFQR-GSCKYGAQCRFVH 26
79*******.************* PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MNRRQELCRN FQRGSCKYGA QCRFVHASSN QQQQQAAKPN PFGFGTSSRQ QQPFGTQSQQ 60
QPQPNPFGFG VQAGAAQSRN APGPAKPFQN KWVRDASAPT KQPEAQPAPQ AAHTSCTDPE 120
SCKQQISDDF KNETPLWKLT CYAHLRSGPC DIVGDVSYEE LRAKAYEEGK RGHPLQSIIE 180
GERNLQNAKL MEFTNLLNNA RPSQTPSFPT VGSFPAVKNT SSFGGSQTNG PPVFSSFSQI 240
GAATNFGSGL RTATPGVPTN ALFGQSTQPA FGQSTQPAFG QSTQPTFGQS AQSTFGSGGM 300
KFGVPDASQT SRQPFGTLQG SSMSSNSNFP KSPSSSVHQR DIDRQSMELL NGMTARTSAM 360
NQAPVEDNRN ENKDDSIWLK EKWAIGEIPL DEPPQRHISH VF*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds double-stranded DNA and the single-stranded RNA polymers poly(rA), poly(rU) and poly(rG), but not poly(rC). Mediates optimal plant architecture through brassinosteroid (BR) signaling. May act as a negative regulator in sterol homeostasis (PubMed:18953406). Acts as negative regulator of BR signaling. Binds to the specific DNA sequence 5'-CTCGC-3' of BZR1 promoter and negatively regulates BZR1. Acts as an antagonistic transcription factor of BZR1 to attenuate the BR signaling pathway and regulate leaf bending. Represses the expression of ILI1, and activates that of IBH1 to balance the regulation activity of BZR1 (PubMed:22570626). {ECO:0000269|PubMed:18953406, ECO:0000269|PubMed:22570626}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by 24-epibrassinolide. {ECO:0000269|PubMed:18953406, ECO:0000269|PubMed:22570626}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP093980 | 0.0 | FP093980.1 Phyllostachys edulis cDNA clone: bphylf053n08, full insert sequence. |
