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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm_27.model.AmTr_v1.0_scaffold00043.33 |
| Common Name | AMTR_s00043p00159690 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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| Family |
GRAS |
| Protein Properties |
Length: 435aa MW: 48809 Da PI: 6.3203 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00043.33 | genome | TAGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 289.2 | 1.2e-88 | 39 | 428 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetse 71
++lLl+c a++ +d +laq++++ l++ as+ gdp+qRl++ f++AL +r +r +++ ++ +++s ++
evm_27.model.AmTr_v1.0_scaffold00043.33 39 EKLLLHCGGALERNDITLAQQIMWVLNNVASSVGDPNQRLTSWFLRALISRASRVCPSAMN-MEASLGAH 107
689***************************************************8888886.55555555 PP
GRAS 72 knsseelaalkl..fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegp 139
++++++++l ++++ P+ f++ + N aI +a+ +++rvHi+D++is+++QWp+L+++L++Rpeg+
evm_27.model.AmTr_v1.0_scaffold00043.33 108 VARVRSISVTQLagYVDLLPWQSFGFCASNGAICKAIGSSQRVHILDISISHCMQWPTLIDSLSKRPEGA 177
7788999999999********************************************************* PP
GRAS 140 pslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...............vakrledlel 191
p +R+T+ + ++ + ++ee+g+rL++fA++ +vpf+f+++ ++ +e+l++
evm_27.model.AmTr_v1.0_scaffold00043.33 178 PLVRLTVPSTRPHVpplLSMSYEEVGHRLSNFAKSRDVPFDFRMIpfedlpnlrdgvkfhHELLMEQLNP 247
******999966669998999**********************************9998444489999** PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
+ L+++ +Eal+Vn++ ++h+l+de + ++ +rde+L+ +++ P++v+vv+++ d++++s+ r++++
evm_27.model.AmTr_v1.0_scaffold00043.33 248 SVLDLRDDEALVVNCQNSVHYLPDEALGIDPcYRDEFLERIRGFHPTIVTVVDEDYDLGHASLSSRISSC 317
*****************************9999************************************* PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpls 330
++y + fd+le+ lp++s +r +E+ +g +i+n++a eg +r+er e+ + +r+++a F +vp+
evm_27.model.AmTr_v1.0_scaffold00043.33 318 FNYLWIPFDALETFLPKDSCQRLEYEAD-IGFKIENIIAFEGLQRTERLESGTRLVQRMKKAQFYSVPFM 386
****************************.***************************************** PP
GRAS 331 ekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
e++ak++k+ll +++ g+ ++ +++ lvl+Wk+++ v+++aW
evm_27.model.AmTr_v1.0_scaffold00043.33 387 EDTAKEVKRLLDEHA-SGWGMKRDDDMLVLTWKGHNAVFATAW 428
***************.899************************ PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 435 aa
Download sequence Send
to blast |
MKAVPPIPLT PPSSISRNEG PLSRVFKGCL GTLDANCIEK LLLHCGGALE RNDITLAQQI 60
MWVLNNVASS VGDPNQRLTS WFLRALISRA SRVCPSAMNM EASLGAHVAR VRSISVTQLA 120
GYVDLLPWQS FGFCASNGAI CKAIGSSQRV HILDISISHC MQWPTLIDSL SKRPEGAPLV 180
RLTVPSTRPH VPPLLSMSYE EVGHRLSNFA KSRDVPFDFR MIPFEDLPNL RDGVKFHHEL 240
LMEQLNPSVL DLRDDEALVV NCQNSVHYLP DEALGIDPCY RDEFLERIRG FHPTIVTVVD 300
EDYDLGHASL SSRISSCFNY LWIPFDALET FLPKDSCQRL EYEADIGFKI ENIIAFEGLQ 360
RTERLESGTR LVQRMKKAQF YSVPFMEDTA KEVKRLLDEH ASGWGMKRDD DMLVLTWKGH 420
NAVFATAWAP QPFQ*
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