PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT5G41090.1 | ||||||||
Common Name | anac095, NAC095 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | NAC | ||||||||
Protein Properties | Length: 212aa MW: 24166 Da PI: 4.2419 | ||||||||
Description | NAC domain containing protein 95 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.9 | 5.5e-25 | 8 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp+G+rF+P+d el v++L kk+ g ++++ +v +e+ di++++P+dLp +++e++wyf++k+ k++ +r+ + W tg++++vl+ AT5G41090.1 8 LPVGMRFRPSDLELAVYFLIKKALGLPMKALTVPDECnDIFSTHPRDLP--GYGSEEHWYFYCKKPKNQV-----TRTKSYNLWIPTGEKTDVLDPkk 98 799***************************99999999***********..345789*******999764.....45555568***********9877 PP NAM 96 .kgelvglkktLvfy...........kgrapkgektdWvmheyrl 128 +gelvg+k++++f +g+++++ +++W+++e +l AT5G41090.1 99 nGGELVGIKHSFTFIeneeeeesdnkNGDEEEPPQCNWFLDEISL 143 77888**********77776666655588888889****999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.62E-30 | 6 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.625 | 8 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-11 | 9 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009029 | anatomy | stamen | ||||
PO:0009030 | anatomy | carpel | ||||
PO:0009031 | anatomy | sepal | ||||
PO:0009032 | anatomy | petal | ||||
PO:0009046 | anatomy | flower | ||||
PO:0009047 | anatomy | stem | ||||
PO:0009052 | anatomy | flower pedicel | ||||
PO:0025022 | anatomy | collective leaf structure | ||||
PO:0007611 | developmental stage | petal differentiation and expansion stage | ||||
PO:0007616 | developmental stage | flowering stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MGPTYRALPV GMRFRPSDLE LAVYFLIKKA LGLPMKALTV PDECNDIFST HPRDLPGYGS 60 EEHWYFYCKK PKNQVTRTKS YNLWIPTGEK TDVLDPKKNG GELVGIKHSF TFIENEEEEE 120 SDNKNGDEEE PPQCNWFLDE ISLPLTVVDT DWTLCHIFYE KVKPEFGNLH IVESESESEE 180 EEEDESVDKP AESLDSVKEK DGTVLPPPPA TP |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 18422059 | 0.0 | ||||
Genevisible | 249338_at | 0.0 | ||||
Expression Atlas | AT5G41090 | - | ||||
AtGenExpress | AT5G41090 | - | ||||
ATTED-II | AT5G41090 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT5G41090.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT5G41090 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT030086 | 0.0 | BT030086.1 Arabidopsis thaliana At5g41090 gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_198925.1 | 1e-155 | NAC domain containing protein 95 | ||||
TrEMBL | Q9FLM0 | 1e-153 | Q9FLM0_ARATH; At5g41090 | ||||
STRING | AT5G41090.1 | 1e-154 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8604 | 17 | 36 |
Link Out ? help Back to Top | |
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Phytozome | AT5G41090.1 |
Entrez Gene | 834111 |
iHOP | AT5G41090 |
wikigenes | AT5G41090 |
Publications ? help Back to Top | |||
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