PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT5G04400.1
Common Nameanac077, NAC077
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 395aa    MW: 44808.9 Da    PI: 5.1786
Description NAC domain containing protein 77
Gene Model
Gene Model ID Type Source Coding Sequence
AT5G04400.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.82.4e-45281691128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                  lppGfrFhP+deel+++yLkkkv+gk+++  + i evdi+k+ePwdL                +k+++kew+fFs  dkk++tg+  +ratk+gyWk 
  AT5G04400.1  28 LPPGFRFHPSDEELISYYLKKKVQGKPMRY-DEIGEVDICKLEPWDLAViiflcflaldfryVLKTRDKEWFFFSALDKKTRTGTSMSRATKQGYWKV 124
                  79***************************9.77**************856899*****9998778899****************************** PP

          NAM  86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  tg+d ++ +   ++ ++g+ ktLvf++gr+p+g  tdWvm+ey+l
  AT5G04400.1 125 TGTDGKIRQGgdGKVTIGTMKTLVFHRGRSPNGLGTDWVMNEYHL 169
                  ********98767778****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-4719174IPR003441NAC domain
PROSITE profilePS5100543.66928219IPR003441NAC domain
PfamPF023652.9E-2429169IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007275Biological Processmulticellular organism development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009006anatomyshoot system
PO:0009025anatomyvascular leaf
PO:0009046anatomyflower
PO:0007095developmental stageLP.08 eight leaves visible stage
PO:0007611developmental stagepetal differentiation and expansion stage
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MARDSKKAGG ALPAPATAMG NAAAETSLPP GFRFHPSDEE LISYYLKKKV QGKPMRYDEI  60
GEVDICKLEP WDLAVIIFLC FLALDFRYVL KTRDKEWFFF SALDKKTRTG TSMSRATKQG  120
YWKVTGTDGK IRQGGDGKVT IGTMKTLVFH RGRSPNGLGT DWVMNEYHLA KNDEGVPQNN  180
TGSRYAPFLE EEWDDDNGER VAIHVPDDGP LPLCVLNKEA PLPLIQYKRK RRISSSQTTQ  240
DHRSFTETII DSTASAEPLD ISERIALRAL NGMLDDLEKE QEPVVVDGNK INEIQQESQL  300
QRKKLIDLNL KEDAPSPLCV VNKETPSPLK YMIDDLEKEQ EPATKRINDL VLKENDEIVV  360
FREMQERESM KAEMEISFLE AQIDALDRKI DHPHK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-32211698140Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO184145500.0
Genevisible245707_at0.0
Expression AtlasAT5G04400-
AtGenExpressAT5G04400-
ATTED-IIAT5G04400-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT5G04400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT5G04400
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_196060.21e-155NAC domain protein
TrEMBLA0A178UM100.0A0A178UM10_ARATH; NAC077
STRINGAT5G04400.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2022046
Representative plantOGRP1715800
Publications ? help Back to Top
  1. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]