PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT1G64105.1 | ||||||||
Common Name | ANAC027, NAC027 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 19217.8 Da PI: 5.8726 | ||||||||
Description | NAC domain containing protein 27 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.2 | 1.2e-17 | 11 | 135 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvgl 102 +dee++ +yL++k++g++ ++ + + e+ ++y+vePw Lp++++ + ew++F kr++ky++ + + +g W +vlsk +ge++g AT1G64105.1 11 SDEEIIENYLRPKINGETSSIPRYVVELaeELYTVEPWLLPRQTAPilNPGEWFYFGKRNRKYSN---LEGVHCEGSWILEDGCIAVLSKeTGEEIGG 105 79****************8887776555479**********5333333555************86...4445568****8888888888768888999 PP NAM 103 kktLvfy...kg.rapkgektdWvmheyrl 128 + + +y kg ++++ + ++W+m eyrl AT1G64105.1 106 TTRFRYYyrnKGdKESRLKMSNWFMREYRL 135 999999977755356666789*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.503 | 2 | 155 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.05E-25 | 11 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-10 | 11 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007275 | Biological Process | multicellular organism development | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000293 | anatomy | guard cell |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MQAEEIICRV SDEEIIENYL RPKINGETSS IPRYVVELAE ELYTVEPWLL PRQTAPILNP 60 GEWFYFGKRN RKYSNLEGVH CEGSWILEDG CIAVLSKETG EEIGGTTRFR YYYRNKGDKE 120 SRLKMSNWFM REYRLYYKSR RVFNGRQVFC IITCNDEHFI E |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
At.36047 | 0.0 | flower |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
Genevisible | 262340_at | 0.0 | ||||
Expression Atlas | AT1G64105 | - | ||||
AtGenExpress | AT1G64105 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT1G64105.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT1G64105 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC007764 | 0.0 | AC007764.2 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence. | |||
GenBank | AK220846 | 0.0 | AK220846.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-38-I06. | |||
GenBank | BT025516 | 0.0 | BT025516.1 Arabidopsis thaliana At1g64105 mRNA, complete cds. | |||
GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001077770.1 | 1e-111 | pentatricopeptide (PPR) repeat-containing protein | ||||
Refseq | NP_564823.1 | 1e-116 | NAC domain containing protein 27 | ||||
TrEMBL | A0A178WJS8 | 1e-115 | A0A178WJS8_ARATH; NAC027 | ||||
TrEMBL | A8MRJ8 | 1e-109 | A8MRJ8_ARATH; Pentatricopeptide (PPR) repeat-containing protein | ||||
TrEMBL | Q9SH61 | 1e-115 | Q9SH61_ARATH; At1g64105 | ||||
STRING | AT1G64100.2 | 1e-110 | (Arabidopsis thaliana) | ||||
STRING | AT1G64105.1 | 1e-116 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15427 | 11 | 17 |
Link Out ? help Back to Top | |
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Phytozome | AT1G64105.1 |
Entrez Gene | 842714 |
iHOP | AT1G64105 |
wikigenes | AT1G64105 |
Publications ? help Back to Top | |||
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