PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT30943
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 194aa    MW: 20502.2 Da    PI: 8.0951
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT30943genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-054769123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ Cgk F+++  L  H  +H
  EMT30943 47 FRCSVCGKAFPSHQALGGHKASH 69
              89*************99998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139128.4E-124671IPR007087Zinc finger, C2H2
SuperFamilySSF576671.19E-847122No hitNo description
SMARTSM003550.00684769IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.7624774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
PfamPF139126.2E-11100123IPR007087Zinc finger, C2H2
PROSITE profilePS501579.411100122IPR007087Zinc finger, C2H2
SMARTSM003550.65100122IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280102122IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055062Biological Processphosphate ion homeostasis
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0001047Molecular Functioncore promoter binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MTHDDYVHLC LMALASVATG GDQAQAAEGQ WLHTVTAAAP AACELRFRCS VCGKAFPSHQ  60
ALGGHKASHR KRAALVLPLQ SVSPAEETVA SSTSSGVGGH RCSVCHRSFA TGQALGGHKR  120
CHYWDGLSVS LTASASGSGS SVRDFDLNLT PVPEKAAAAG MRRWGEEEEV QSPLPFKKRR  180
LSSPSLELNL ILLD
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in abscisic acid (ABA) signaling. Required for the regulation of the cross-talk between NADPH oxidase, hydrogen peroxide and MAP kinase in ABA signaling. Regulates the expression of the NADPH oxidase genes RBOHB and RBOHE, and the MAPK genes MPK1, MPK4, MPK5, MPK7 and MPK14. Regulates ABA-induced hydrogen peroxide production and antioxidant defense. Required for tolerance to water stress and oxidative stress. {ECO:0000269|PubMed:25071223}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00622PBMTransfer from AT5G04340Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) and hydrogen peroxide. {ECO:0000269|PubMed:25071223}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182764.11e-140zinc finger protein ZAT6-like
SwissprotQ75KE52e-52ZFP36_ORYSJ; Zinc finger protein 36
TrEMBLA0A453AKD81e-139A0A453AKD8_AEGTS; Uncharacterized protein
STRINGEMT309431e-139(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34123273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.11e-32zinc finger of Arabidopsis thaliana 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Zhang H, et al.
    A novel rice C2H2-type zinc finger protein, ZFP36, is a key player involved in abscisic acid-induced antioxidant defence and oxidative stress tolerance in rice.
    J. Exp. Bot., 2014. 65(20): p. 5795-809
    [PMID:25071223]
  4. Li W, et al.
    A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance.
    Cell, 2017. 170(1): p. 114-126.e15
    [PMID:28666113]